Log-odds matrix for Motif 0 arcr.tt.tGAAACa (75) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.913 1.108 -1.517 0.948 0.301 -0.058 -0.238 -0.079 -0.555 -0.651 1.550 1.322 1.372 -1.606 1.051 #C -0.125 -2.391 2.030 -0.682 0.835 -0.871 -1.166 0.777 -1.039 -2.644 -6.567 -6.156 -1.721 2.218 -1.655 #T -1.376 -1.979 -1.351 -1.999 -0.695 0.610 0.987 -0.567 0.950 -9.027 -3.513 -1.584 -5.706 -2.181 -1.529 #G -0.766 0.073 -2.051 0.065 -1.022 -0.853 -5.564 -0.022 -1.393 2.123 -3.176 -1.162 -0.803 -5.134 -0.138 Sequence Logo # --------------- # -- 2.30 bits # # C # C GA C # C GA AC # C GAAAC # ACA T TGAAACA # AACA TT TGAAACA -- 0.29 bits # --------------- # arcr.tt.tGAAACa Gamma: 0.50408 Motif 0 arcr.tt.tGAAACa (75) (Bits: 9.99 MAP: 0.00 D: 0.250 17) E: 22.503 ch: 22.62 f: 0.24 Ra: 0.6154 AAAAAAAAAAAAAAA 0 3.861 AACAAAAAAAAAACA 0 11.232 AACAAAAAACAAACA 0 9.239 AACAAAAAAGAAACA 0 14.006 AACAAAACCGAAACA 0 14.378 AACAACCCCGAAACA 0 12.637 AACACCCCCGAAACA 0 13.171 AACACCCCGGAAACA 0 12.817 AACACGTCGGAAACA 0 14.988 AACACGTCTGAAACA 0 17.331 CACCCGTCTGAAACA 0 14.663 CACCCGTCTGAAACC 0 11.957 CCCCCTTGTGAAACC 0 9.122 CGCGCTTGTGAAACG 0 13.85 CGCGCTTGTGAAACG 0 13.85 GGCGGTTGTGACCCG 0 0.781 GGCGGTTGTGAGCCG 0 5.775 GGCGTTTTTGAGGCG 0 6.475 TGGGTTTTTGATGCG 0 1.362 TTTTTTTTTGGTGCT 0 6.094 *************** MAP Score: 0.000000 Log-odds matrix for Motif 1 .ygaaACr..tm..a (81) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.308 -2.211 -0.156 1.207 1.043 1.596 -3.420 1.006 0.130 0.062 -0.026 0.424 -0.805 -0.252 1.261 #C 0.298 0.441 -1.594 -0.315 -1.159 -3.728 2.427 -1.477 -0.236 -1.494 -0.020 0.494 -0.012 -0.902 -1.667 #T -0.146 1.085 -6.725 -1.597 -1.890 -9.139 -9.241 -1.663 -0.183 0.021 0.531 -0.111 0.635 -0.663 -2.374 #G -0.972 -5.672 1.883 -6.131 -0.088 -5.025 -2.806 0.059 0.260 0.620 -2.160 -3.344 -0.366 1.288 -0.744 Sequence Logo # --------------- # -- 2.30 bits # C # C # AC # G AC # GA AC A # TGAAACA A # TGAAACA TGA -- 0.29 bits # --------------- # .ygaaACr..tm..a Gamma: 0.53339 Motif 1 .ygaaACr..tm..a (81) (Bits: 8.62 MAP: 0.00 D: 0.520 18) E: 21.356 ch: 13.29 f: 0.39 Ra: 0.6683 AAAAAACAAAAAAAA 1 6.014 ACAAAACAAAAAAAA 1 8.666 ACAAAACAAAAAAAA 1 8.666 ACCAAACAAAAACCA 1 7.371 ACCAAACAAAAACCA 1 7.371 ACGAAACACCCACCA 1 8.932 CCGAAACACCCACGA 1 11.112 CCGAAACACGCCCGA 1 13.296 CGGAAACACGCCGGA 1 6.829 CTGAAACACGCCGGA 1 13.586 CTGAAACAGGCCGGA 1 14.082 CTGACACCGGGCGGA 1 7.257 CTGACACCGGTCTGA 1 10.949 GTGACACGGGTCTGA 1 11.215 GTGCGACGGGTCTGC 1 7.836 GTGCGACGGTTTTGC 1 6.632 TTGCGACGTTTTTGG 1 7.938 TTGCGACGTTTTTGG 1 7.938 TTGTGACGTTTTTTG 1 4.705 TTGTTACTTTTTTTT 1 1.049 *************** MAP Score: 0.000000 Log-odds matrix for Motif 2 ....mtgAAACa... (77) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.579 0.129 0.480 -0.150 0.459 -1.949 -0.656 1.582 1.373 1.588 -2.268 1.182 0.547 0.660 -0.775 #C -1.167 1.040 0.006 -0.311 0.389 -0.401 -2.943 -3.489 -3.798 -3.229 2.301 -2.177 -0.140 -0.435 0.856 #T -0.657 -1.296 -0.158 0.577 -0.106 1.200 -3.128 -6.714 -1.371 -6.754 -2.273 -2.529 -0.732 -0.661 0.476 #G 0.400 -0.208 -1.126 -1.094 -2.950 -2.230 2.064 -4.185 -3.006 -5.943 -8.598 -0.056 -0.036 -0.204 -2.093 Sequence Logo # --------------- # -- 2.30 bits # # C # GA AC # GAAAC # TGAAACA # TGAAACA # C TGAAACA A -- 0.29 bits # --------------- # ....mtgAAACa... Gamma: 0.51263 Motif 2 ....mtgAAACa... (77) (Bits: 9.63 MAP: 0.00 D: 0.290 10) E: 18.983 ch: 13.29 f: 0.33 Ra: 0.6455 AAAAAAAAAACAAAA 2 7.35 AAAAACAAAACAAAA 2 8.898 AAAAACCAAACAAAA 2 6.611 AAAAACGAAACAAAC 2 13.249 AAAAACGAAACAAAC 2 13.249 ACACACGAAACAAAC 2 13.999 ACACAGGAAACAAAC 2 12.17 ACCCCTGAAACACAC 2 14.369 CCCCCTGAAACACCC 2 11.528 CCCGCTGAAACACCC 2 10.745 GCCGCTGAAACACCC 2 12.312 GCCGCTGAAACACCC 2 12.312 GCCTCTGAAACAGGG 2 11.369 GCGTCTGAAACCGGT 2 9.447 GGGTCTGAAACGGGT 2 10.32 GGTTTTGAAACGGGT 2 10.793 GGTTTTGAAACGGGT 2 10.793 TGTTTTGAGACGTTT 2 4.204 TGTTTTGATACGTTT 2 5.839 TTTTTTGCTACTTTT 2 -2.793 *************** MAP Score: 0.000000 Log-odds matrix for Motif 3 aarcr....trAarc (80) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.186 1.063 1.148 -2.360 1.099 -0.011 -0.653 -0.159 0.451 -2.028 0.247 1.376 1.282 1.158 -3.233 #C -0.778 -0.563 -2.715 1.846 -1.936 0.668 0.634 0.316 0.400 -0.464 -2.294 -1.110 -3.172 -3.981 2.074 #T -3.456 -1.485 -6.727 -0.358 -3.569 0.111 0.278 0.473 -0.319 1.146 -4.356 -3.103 -1.918 -3.306 -0.816 #G -0.432 -1.008 0.518 -1.743 0.402 -1.853 -0.457 -2.113 -1.440 -1.226 1.682 -2.176 -0.731 0.402 -2.065 Sequence Logo # --------------- # -- 2.30 bits # # # C # C A C # A C GAA C # AAACA TGAAAC # AAACA TGAAAC -- 0.29 bits # --------------- # aarcr....trAarc Gamma: 0.52976 Motif 3 aarcr....trAarc (80) (Bits: 9.03 MAP: 0.00 D: 0.400 19) E: 18.583 ch: 17.10 f: 0.27 Ra: 0.6234 AAACAAAAAAAAAAC 3 10.079 AAACAAAAACAAAAC 3 11.643 AAACAAAAACAAAAC 3 11.643 AAACAACAACAAAAC 3 12.93 AAACAACAACAAAAC 3 12.93 AAACACCCAGCAAAC 3 10.781 AAACACCCAGGAAAC 3 14.757 AAACACCCCGGAAAC 3 14.706 AAACACCCCTGAAAC 3 17.078 AAACACCCCTGAAAC 3 17.078 AAACACCCCTGAAAC 3 17.078 AAACCCGGCTGAAAC 3 10.523 CCCCCCGGCTGAAGC 3 2.314 CCGCGGGTCTGAAGC 3 7.95 CCGCGGTTGTGACGC 3 2.391 CCGCGTTTGTGAGGC 3 6.796 GGGGGTTTTTGCGGC 3 1.743 GGGTGTTTTTGCGGG 3 -1.011 GTGTGTTTTTGGGGT 3 -1.305 GTGTGTTTTTGGTGT 3 -1.577 *************** MAP Score: 0.000000 Log-odds matrix for Motif 4 rca.wt.tgAaACra (66) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.038 -0.568 1.108 0.103 0.528 -0.154 0.113 -0.907 -1.301 1.600 1.308 1.479 -1.458 1.196 0.830 #C -2.317 1.898 -2.074 0.931 -0.247 -0.879 0.820 -2.530 -2.776 -8.051 -2.249 -5.524 2.301 -2.463 -0.600 #T -1.847 -1.732 -1.794 -0.882 0.141 0.801 -0.333 1.253 -1.827 -4.386 -1.222 -3.884 -4.305 -2.945 -0.755 #G 0.248 -2.601 -0.084 -0.319 -2.713 -1.875 -1.105 -2.898 2.097 -9.299 -3.071 -1.324 -8.784 0.056 -0.607 Sequence Logo # --------------- # -- 2.30 bits # # C # GA C # C GA AC # C TGAAACA # ACA TGAAACA # ACAC T TGAAACAA -- 0.29 bits # --------------- # rca.wt.tgAaACra Gamma: 0.45233 Motif 4 rca.wt.tgAaACra (66) (Bits: 10.99 MAP: 0.00 D: 0.230 12) E: 17.008 ch: 17.10 f: 0.20 Ra: 0.5949 AAAAAAAAAAAAAAA 4 4.915 AAAAAAAACAAACAA 4 7.199 ACAAAAAAGAAACAA 4 14.538 ACAAAAACGAAACAA 4 12.915 ACAAAAAGGAAACAA 4 12.547 ACACACCTGAAACAA 4 17.508 ACACACCTGAAACAA 4 17.508 ACACACCTGAAACAA 4 17.508 ACACCGCTGAAACAA 4 15.737 ACACCGCTGAAACAA 4 15.737 ACACCTCTGAAACAC 4 16.983 CCACCTCTGAAACAC 4 13.628 GCCCCTCTGAAACAC 4 13.011 GCGCGTCTGAAACCG 4 8.869 GCGGTTGTGAAACGG 4 11.067 GCGGTTGTGAAACGG 4 11.067 GCGGTTTTGACACGG 4 8.282 GCGGTTTTGAGCCGT 4 0.84 GGGTTTTTGATGCGT 4 7.349 TTTTTTTTTATGCGT 4 7.972 *************** MAP Score: 0.000000 Log-odds matrix for Motif 5 .TgaAACa (80) # 0 1 2 3 4 5 6 7 #A -0.599 -1.443 -1.115 1.252 1.531 1.554 -2.791 1.212 #C 0.979 -1.379 -1.105 -1.005 -6.452 -3.479 2.357 -6.854 #T -0.387 1.324 -3.383 -2.497 -8.209 -4.788 -2.641 -1.944 #G 0.126 -7.246 2.071 -1.093 -1.557 -3.165 -6.769 -0.109 Sequence Logo # -------- # -- 2.30 bits # C # C # G AC # G AAC # TGAAACA # TGAAACA # CTGAAACA -- 0.29 bits # -------- # .TgaAACa Gamma: 0.52832 Motif 5 .TgaAACa (80) (Bits: 8.01 MAP: 0.00 D: 0.140 1) E: 14.243 ch: 7.63 f: 0.70 Ra: 0.7329 AAAAAACA 5 4.749 AACAAACA 5 4.759 ACCAAACA 5 4.823 CCGAAACA 5 9.577 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 CTGAAACA 5 12.28 GTGAAACA 5 11.427 GTGAAACG 5 10.106 GTGCAACG 5 7.849 GTGCAACG 5 7.849 GTGCAACG 5 7.849 TTGGAACG 5 7.248 TTGGGACG 5 4.16 TTGTGCCT 5 -4.112 ******** MAP Score: 0.000000 Log-odds matrix for Motif 6 .TGAaACr (78) # 0 1 2 3 4 5 6 7 #A 0.262 -2.523 -2.676 1.347 1.299 1.551 -3.135 1.089 #C 0.876 -0.476 -1.945 -2.426 -0.985 -2.881 2.318 -1.842 #T -1.010 1.314 -4.465 -1.330 -2.530 -6.741 -2.144 -2.208 #G -0.461 -4.016 2.340 -3.788 -1.631 -2.974 -3.607 0.118 Sequence Logo # -------- # -- 2.30 bits # G C # G C # G AC # G AC # TGAAAC # TGAAACA # TGAAACA -- 0.29 bits # -------- # .TGAaACr Gamma: 0.51621 Motif 6 .TGAaACr (78) (Bits: 7.78 MAP: 0.00 D: 0.140 5) E: 11.914 ch: 7.63 f: 0.65 Ra: 0.7065 AACAAACA 6 3.398 ACGAAACA 6 9.73 ACGAAACA 6 9.73 ACGAAACA 6 9.73 ACGAAACA 6 9.73 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACA 6 12.134 CTGAAACC 6 9.203 CTGAAACG 6 11.163 GTGACACG 6 7.542 GTGACACG 6 7.542 GTGCCACG 6 3.769 GTGGGACG 6 1.761 TTGTGACG 6 3.67 TTGTTCGT 6 -0.155 ******** MAP Score: 0.000000 Log-odds matrix for Motif 7 .TgaAACa (81) # 0 1 2 3 4 5 6 7 #A 0.040 -4.015 -0.012 1.254 1.533 1.516 -3.448 1.214 #C 0.954 -3.446 -2.514 -0.708 -4.179 -3.142 2.240 -3.623 #T -0.471 1.568 -2.349 -2.695 -4.766 -4.401 -1.412 -1.918 #G -0.927 -6.701 1.734 -1.360 -2.155 -2.258 -3.192 -0.255 Sequence Logo # -------- # -- 2.30 bits # # C # T A C # T AAC # TGAAACA # TGAAACA # CTGAAACA -- 0.29 bits # -------- # .TgaAACa Gamma: 0.53499 Motif 7 .TgaAACa (81) (Bits: 7.99 MAP: 0.00 D: 0.200 6) E: 11.505 ch: 7.63 f: 0.70 Ra: 0.7163 ACAAAACA 7 4.339 ATAAAACA 7 9.353 ATAAAACA 7 9.353 ATAAAACA 7 9.353 ATCAAACA 7 6.851 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACA 7 12.013 CTGAAACC 7 7.176 GTGCAACG 7 6.701 GTGCAACG 7 6.701 GTGCAACG 7 6.701 TTGGAACG 7 6.505 TTGGCCCG 7 -3.865 TTGGGGTT 7 -6.272 ******** MAP Score: 0.000000 Log-odds matrix for Motif 8 ACARTACGTYwT.cT (6) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.623 -9.963 1.400 1.136 -9.967 1.623 -9.967 -9.949 -0.001 -9.966 0.814 -9.959 -0.181 -1.183 -0.805 #C -9.897 2.355 -9.965 -9.966 -9.940 -9.966 2.509 -9.966 -9.912 1.935 -9.967 -9.959 1.296 2.030 -9.964 #T -9.961 -9.967 -9.956 -9.961 1.623 -9.959 -9.950 -9.783 1.058 0.017 0.404 1.400 -1.215 -1.215 1.327 #G -9.958 -0.794 -0.291 0.706 -9.938 -9.963 -9.966 2.509 -9.967 -9.962 -9.967 -0.291 -0.295 -9.967 -9.929 Sequence Logo # --------------- # CG -- 2.30 bits # C CG # C CG # AC TACG C # ACA TACG C T C # ACA TACG C T CT # ACAATACGTC T CT # ACAATACGTCATCCT -- 0.29 bits # --------------- # ACARTACGTYwT.cT Gamma: 0.13698 Motif 8 ACARTACGTYwT.cT (6) (Bits: 19.92 MAP: 0.00 D: 0.170 9) E: 11.371 ch: 8.61 f: 0.07 Ra: 0.5352 ACAATACGACAGAAA 8 15.066 ACAATACGACAGACA 8 18.279 ACAATACGACAGACA 8 18.279 ACAATACGACAGACT 8 20.411 ACAATACGACATCCT 8 23.579 ACAATACGACATCCT 8 23.579 ACAATACGTCATCCT 8 24.638 ACAATACGTCATCCT 8 24.638 ACAATACGTCATCCT 8 24.638 ACAATACGTCATCCT 8 24.638 ACAATACGTCATCCT 8 24.638 ACAATACGTCTTCCT 8 24.228 ACAGTACGTCTTCCT 8 23.798 ACAGTACGTCTTCCT 8 23.798 ACAGTACGTCTTCCT 8 23.798 ACAGTACGTCTTGCT 8 22.207 ACGGTACGTTTTGCT 8 18.598 ACGGTACGTTTTGCT 8 18.598 AGGGTACGTTTTGCT 8 15.449 AGGGTACGTTTTTTT 8 11.284 *************** MAP Score: 0.000000 Log-odds matrix for Motif 9 tGTTtcA. (80) # 0 1 2 3 4 5 6 7 #A -1.906 -2.726 -4.591 -8.423 -2.473 -3.753 1.329 -0.386 #C -0.008 -7.424 -3.067 -1.472 -0.964 2.057 -8.953 0.037 #T 1.184 -2.820 1.551 1.528 1.251 -0.971 -1.454 -0.486 #G -6.811 2.364 -3.576 -9.396 -1.140 -1.139 -1.410 0.953 Sequence Logo # -------- # -- 2.30 bits # G # G # GT C # GTT C # TGTTTCA # TGTTTCA # TGTTTCAG -- 0.29 bits # -------- # tGTTtcA. Gamma: 0.52822 Motif 9 tGTTtcA. (80) (Bits: 8.01 MAP: 0.00 D: 0.330 9) E: 11.317 ch: 7.63 f: 0.64 Ra: 0.7025 AGCCACAA 9 -3.554 CGTCCCAA 9 4.471 CGTTCCAA 9 7.471 CGTTCCAC 9 7.894 CGTTGCAC 9 7.718 CGTTGCAC 9 7.718 CGTTTCAC 9 10.109 TGTTTCAC 9 11.301 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCAG 9 12.217 TGTTTCGG 9 9.478 TGTTTGGT 9 4.843 TGTTTTTT 9 4.967 TGTTTTTT 9 4.967 ******** MAP Score: 0.000000 Log-odds matrix for Motif 10 tgaAACr. (80) # 0 1 2 3 4 5 6 7 #A -1.166 -0.698 1.262 1.516 1.573 -2.803 1.174 -0.148 #C -1.452 -1.333 -1.128 -9.547 -3.676 2.375 -6.587 -0.901 #T 1.280 -4.523 -2.562 -9.287 -6.575 -2.995 -2.096 0.266 #G -5.595 2.028 -1.021 -1.300 -3.319 -6.541 0.115 0.345 Sequence Logo # -------- # -- 2.30 bits # C # C # G AC # G AAC # TGAAAC # TGAAACA # TGAAACA -- 0.29 bits # -------- # tgaAACr. Gamma: 0.52820 Motif 10 tgaAACr. (80) (Bits: 8.14 MAP: 0.00 D: 0.230 15) E: 10.798 ch: 3.74 f: 0.83 Ra: 0.7312 AAAAACAA 10 5.888 AAAAACAA 10 5.888 CCAAACAA 10 4.967 CCAAACAA 10 4.967 CGAAACAC 10 7.575 TGAAACAC 10 10.307 TGAAACAC 10 10.307 TGAAACAG 10 11.553 TGAAACAG 10 11.553 TGAAACAG 10 11.553 TGAAACAG 10 11.553 TGAAACAG 10 11.553 TGAAACAG 10 11.553 TGAAACGG 10 10.494 TGCAACGT 10 8.025 TGCAACGT 10 8.025 TGCAACGT 10 8.025 TGGAACGT 10 8.132 TGGGACGT 10 5.316 TGTGCCTT 10 -3.685 ******** MAP Score: 0.000000 Log-odds matrix for Motif 11 tgaAACr. (81) # 0 1 2 3 4 5 6 7 #A -1.487 -0.740 1.274 1.530 1.577 -3.309 1.199 0.104 #C -0.887 -0.904 -1.214 -4.388 -3.684 2.387 -6.914 -1.000 #T 1.245 -3.981 -2.565 -7.211 -7.956 -2.748 -2.211 0.273 #G -3.097 1.978 -1.046 -1.744 -3.384 -8.440 0.066 -0.033 Sequence Logo # -------- # -- 2.30 bits # C # C # AC # G AAC # TGAAACA # TGAAACA # TGAAACA -- 0.29 bits # -------- # tgaAACr. Gamma: 0.53109 Motif 11 tgaAACr. (81) (Bits: 8.07 MAP: 0.00 D: 0.160 0) E: 10.713 ch: 4.20 f: 0.83 Ra: 0.7295 AAAAACAA 11 5.844 AAAAACAA 11 5.844 CCAAACAA 11 6.28 CCAAACAA 11 6.28 CGAAACAA 11 9.162 GGAAACAA 11 6.952 TGAAACAC 11 10.19 TGAAACAC 11 10.19 TGAAACAG 11 11.157 TGAAACAG 11 11.157 TGAAACAG 11 11.157 TGAAACAG 11 11.157 TGAAACAG 11 11.157 TGAAACGG 11 10.024 TGCAACGT 11 7.842 TGCAACGT 11 7.842 TGCAACGT 11 7.842 TGGAACGT 11 8.01 TGGCACGT 11 2.092 TGTGCCTT 11 -4.321 ******** MAP Score: 0.000000 Log-odds matrix for Motif 12 ..TGaaAC (80) # 0 1 2 3 4 5 6 7 #A -0.137 0.345 -2.510 -2.053 1.121 1.236 1.563 -2.711 #C -0.893 0.988 -1.365 -1.969 -2.020 -0.481 -9.002 2.351 #T 0.065 -1.483 1.431 -5.216 -0.648 -3.572 -4.515 -2.986 #G 0.626 -0.507 -9.125 2.306 -1.991 -1.087 -2.698 -3.669 Sequence Logo # -------- # -- 2.30 bits # C # G C # G AC # TG AC # TG AAC # TGAAAC # CTGAAAC -- 0.29 bits # -------- # ..TGaaAC Gamma: 0.52910 Motif 12 ..TGaaAC (80) (Bits: 7.16 MAP: 0.00 D: 0.190 10) E: 10.204 ch: 5.63 f: 0.72 Ra: 0.7050 AAACAAAC 12 2.0 AACGAAAC 12 7.42 AACGAAAC 12 7.42 AATGAAAC 12 10.216 CATGAAAC 12 9.46 CATGAAAC 12 9.46 CCTGAAAC 12 10.103 GCTGAAAC 12 11.622 GCTGAAAC 12 11.622 GCTGAAAC 12 11.622 GCTGAAAC 12 11.622 GCTGAAAC 12 11.622 GCTGAAAC 12 11.622 GCTGCCAC 12 6.764 GCTGCCAC 12 6.764 TGTGGCAC 12 4.737 TGTGTCAC 12 6.08 TGTGTGAC 12 5.474 TGTGTGAC 12 5.474 TTTGTGGC 12 0.237 ******** MAP Score: 0.000000 Log-odds matrix for Motif 13 yGTTtcA. (80) # 0 1 2 3 4 5 6 7 #A -1.984 -2.724 -5.223 -9.328 -2.542 -3.680 1.358 -0.425 #C 0.083 -8.324 -3.358 -1.537 -0.952 2.030 -8.793 0.006 #T 1.171 -2.619 1.564 1.533 1.226 -0.880 -1.693 -0.427 #G -6.784 2.354 -3.566 -9.404 -0.893 -1.108 -1.373 0.956 Sequence Logo # -------- # -- 2.30 bits # G # G # GTT C # GTT C # GTTTCA # TGTTTCA # TGTTTCAG -- 0.29 bits # -------- # yGTTtcA. Gamma: 0.52716 Motif 13 yGTTtcA. (80) (Bits: 8.02 MAP: 0.00 D: 0.160 2) E: 10.166 ch: 7.63 f: 0.64 Ra: 0.6978 AGGCACAA 13 -4.312 CGTCCCAA 13 4.475 CGTTCCAA 13 7.545 CGTTCCAC 13 7.976 CGTTGCAC 13 8.035 CGTTGCAC 13 8.035 CGTTGCAC 13 8.035 TGTTTCAC 13 11.242 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTCAG 13 12.192 TGTTTGGG 13 6.323 TGTTTGGT 13 4.94 TGTTTTGT 13 5.168 TGTTTTTT 13 4.848 ******** MAP Score: 0.000000 Log-odds matrix for Motif 14 aAACRary (81) # 0 1 2 3 4 5 6 7 #A 1.279 1.577 1.550 -4.510 1.226 0.924 0.658 -1.685 #C -0.931 -5.342 -9.057 2.369 -4.917 -1.898 -1.799 1.484 #T -2.380 -9.239 -4.422 -2.344 -4.169 -0.752 -0.695 0.322 #G -1.596 -2.675 -2.349 -3.560 0.309 -0.280 0.433 -6.170 Sequence Logo # -------- # -- 2.30 bits # C # C # AAC # AAC # AAACA # AAACA C # AAACAAAC -- 0.29 bits # -------- # aAACRary Gamma: 0.53520 Motif 14 aAACRary (81) (Bits: 7.80 MAP: 0.00 D: 0.180 7) E: 9.289 ch: 4.49 f: 0.87 Ra: 0.6880 AAACAAAA 14 7.898 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAAAC 14 11.067 AAACAACC 14 8.61 AAACAACC 14 8.61 AAACAAGC 14 10.842 AAACACGC 14 8.02 AAACAGGC 14 9.638 AAACGGGC 14 8.721 CAACGGGT 14 5.349 CAACGGGT 14 5.349 CAACGGGT 14 5.349 GAACGTTT 14 7.121 GAACGTTT 14 7.121 TGGGGTTT 14 -3.524 ******** MAP Score: 0.000000 Log-odds matrix for Motif 15 aw..TgarAcr.ryy (81) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.255 0.653 -0.069 0.707 -7.520 -0.826 0.930 0.908 1.378 -0.763 0.820 -0.421 0.925 -3.367 -0.177 #C -1.146 -1.599 0.120 -0.133 -0.779 -0.523 -3.136 -0.127 -1.953 1.652 -2.005 0.604 -4.848 0.090 0.146 #T -3.526 0.311 -0.387 -0.622 1.465 -6.022 -0.427 -2.664 -4.034 -0.354 -0.657 -0.219 -3.464 1.241 0.667 #G -0.570 -2.566 0.520 -0.820 -9.409 1.974 -0.544 0.030 -0.934 -5.856 0.018 0.274 0.989 -3.579 -5.635 Sequence Logo # --------------- # -- 2.30 bits # # # # TG A # A TG AC T # A TG AC AT # AA ATGAAACA GTT -- 0.29 bits # --------------- # aw..TgarAcr.ryy Gamma: 0.53123 Motif 15 aw..TgarAcr.ryy (81) (Bits: 8.78 MAP: 0.00 D: 0.370 7) E: 8.588 ch: 7.62 f: 0.20 Ra: 0.5827 AAAACAAAAAAAACA 15 4.631 AAAACAAAAAAAACA 15 4.631 AAAACCAAACAAACA 15 7.349 AAAATCAAACACACA 15 10.618 AACATCAAACACACA 15 10.807 AACATGAAACACACC 15 13.627 AACATGAAACACAGC 15 9.958 AACATGAAACACATC 15 14.778 AACATGAAACACATC 15 14.778 ACCCTGACACACCTC 15 4.878 ACGCTGACACCGGTC 15 7.96 ACGCTGCCACGGGTT 15 6.438 AGGCTGGCACGGGTT 15 8.063 CTGCTGGCACGGGTT 15 8.539 CTGGTGGGACGGGTT 15 8.009 CTGGTGGGCCGGGTT 15 4.678 GTGGTGTGCCGTGTT 15 4.878 GTTTTGTGGTTTGTT 15 2.507 GTTTTGTGGTTTGTT 15 2.507 GTTTTGTGGTTTGTT 15 2.507 *************** MAP Score: 0.000000 Log-odds matrix for Motif 16 r.ytrYgycry.ty. (83) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.592 -0.656 -7.768 -0.636 0.405 -5.906 -0.930 -1.314 -4.815 1.034 -5.628 -1.367 -0.263 -2.171 -2.506 #C -2.102 0.443 0.588 -0.296 -3.690 0.410 -2.105 0.209 1.925 -2.626 1.017 0.934 -1.357 0.111 1.129 #T -0.372 0.538 1.130 0.964 -0.852 1.224 -0.372 1.038 -0.084 -2.598 0.975 0.408 0.794 0.998 -0.008 #G 0.322 -1.057 -2.833 -3.506 1.103 -5.682 1.616 -9.466 -3.484 0.531 -9.034 -0.696 -0.834 -0.959 0.428 Sequence Logo # --------------- # -- 2.30 bits # # # # C # TG C T # TT TGTCAT T # A TTGTGTCACCTTC -- 0.29 bits # --------------- # r.ytrYgycry.ty. Gamma: 0.54469 Motif 16 r.ytrYgycry.ty. (83) (Bits: 7.97 MAP: 0.00 D: 0.360 1) E: 8.049 ch: 5.72 f: 0.22 Ra: 0.5856 AACAACAACACAAAC 16 9.921 AACAACAACACCACC 16 4.346 AACAACCCCACCACC 16 4.694 ACCCACGCCACCACC 16 9.854 ACCCACGCCACCCCC 16 8.76 ACCCACGCCACCCCC 16 8.76 ACCCCCGCCACCCCC 16 4.665 ACCCGTGCCACCGGC 16 9.725 CCGGGTGCCACCGGC 16 0.4 GCTTGTGTCACCGGC 16 12.086 GGTTGTGTCATCTTG 16 13.428 GGTTGTGTCCTGTTG 16 8.138 GGTTGTGTCGTGTTG 16 11.295 GTTTGTGTCGTGTTG 16 12.89 GTTTGTGTCGTTTTG 16 13.994 GTTTGTGTCGTTTTG 16 13.994 TTTTGTGTTGTTTTT 16 10.855 TTTTGTTTTGTTTTT 16 8.867 TTTTTTTTTGTTTTT 16 6.912 TTTTTTTTTGTTTTT 16 6.912 *************** MAP Score: 0.000000 Log-odds matrix for Motif 17 AAACrary (81) # 0 1 2 3 4 5 6 7 #A 1.550 1.574 1.351 -5.102 1.112 0.984 0.592 -1.139 #C -5.747 -4.698 -2.577 2.372 -6.181 -0.564 -1.886 1.016 #T -8.375 -4.925 -3.017 -1.991 -4.618 -0.938 -1.114 0.551 #G -1.937 -3.372 -0.768 -8.939 0.689 -1.321 0.836 -2.978 Sequence Logo # -------- # -- 2.30 bits # C # C # AA C # AA C # AAAC # AAACAA # AAACAAAC -- 0.29 bits # -------- # AAACrary Gamma: 0.53113 Motif 17 AAACrary (81) (Bits: 7.84 MAP: 0.00 D: 0.210 17) E: 7.948 ch: 1.21 f: 0.91 Ra: 0.7024 AAACAAAA 17 8.396 AAACAAAA 17 8.396 AAACAAAC 17 10.551 AAACAAAC 17 10.551 AAACAAAC 17 10.551 AAACAAAC 17 10.551 AAACAAAC 17 10.551 AAACAACC 17 8.073 AAACAACC 17 8.073 AAACAAGC 17 10.795 AAACAAGC 17 10.795 AAACGCGC 17 8.824 AAACGCGG 17 4.83 AAACGCGT 17 8.359 AAACGCGT 17 8.359 AACCGGGT 17 3.674 AAGCGGGT 17 5.483 AAGCGTGT 17 5.866 AAGCGTTT 17 6.409 GCGCGTTT 17 8.824 ******** MAP Score: 0.000000 Log-odds matrix for Motif 18 wrr.attk.yAa.ry (83) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.705 0.903 0.274 0.480 1.054 -0.811 -2.483 -0.839 0.613 -3.361 1.356 0.879 -0.705 0.055 -2.090 #C -1.229 -0.929 -1.441 0.033 -1.558 -0.329 -0.373 -6.729 0.257 0.604 -2.131 -2.326 0.726 -4.084 0.751 #T 0.265 -3.118 -2.056 -0.567 -0.852 1.021 1.249 0.309 -0.530 1.053 -4.716 -0.210 0.280 -5.083 0.687 #G -4.837 0.586 1.406 -0.238 -1.014 -3.392 -2.323 1.241 -1.339 -2.631 -0.581 -0.997 -0.592 1.873 -0.725 Sequence Logo # --------------- # -- 2.30 bits # # # # G # T A G # G ATT TA G # AAG ATTGATAA GT -- 0.29 bits # --------------- # wrr.attk.yAa.ry Gamma: 0.54442 Motif 18 wrr.attk.yAa.ry (83) (Bits: 7.70 MAP: 0.00 D: 0.330 0) E: 6.556 ch: 4.81 f: 0.18 Ra: 0.5698 AAAAAAAAACAAAAA 18 -0.005 AAAAAACAACAAAAC 18 4.946 AAAAAACGACAAAAC 18 7.026 AAAAACCGACAACAC 18 8.939 AAAAACCGACAACGC 18 10.757 AACAACGGACAACGC 18 7.092 AACAACTGACAACGC 18 10.664 AAGCACTGACAACGC 18 13.064 AAGCATTGCGAACGC 18 10.823 ACGCATTGCTAACGG 18 11.199 CCGCATTGCTAACGG 18 9.265 CCGCATTGCTACGGG 18 4.742 CGGGCTTGCTAGGGT 18 6.115 TGGGCTTGCTAGGGT 18 7.609 TGGGGTTTCTAGTGT 18 8.093 TGGGGTTTGTCTTGT 18 3.797 TGGGGTTTGTGTTGT 18 5.347 TGGTTTTTTTGTTGT 18 5.989 TGGTTTTTTTGTTGT 18 5.989 TGTTTTTTTTGTTGT 18 2.527 *************** MAP Score: 0.000000 Log-odds matrix for Motif 19 Rycty.rR (83) # 0 1 2 3 4 5 6 7 #A 1.198 -8.171 -1.956 -0.871 -6.115 -0.605 1.220 1.297 #C -6.268 1.218 2.086 -1.918 1.273 -1.266 -3.517 -7.802 #T -7.053 0.853 -1.255 1.118 0.811 0.372 -3.977 -7.984 #G 0.517 -5.330 -2.329 -1.283 -6.540 0.744 0.248 0.193 Sequence Logo # -------- # -- 2.30 bits # # # C # C # A C AA # ATCTC AA # ACCTT AA -- 0.29 bits # -------- # Rycty.rR Gamma: 0.54652 Motif 19 Rycty.rR (83) (Bits: 6.57 MAP: 0.00 D: 0.270 11) E: 6.295 ch: 0.29 f: 0.83 Ra: 0.6582 ACAACAAA 19 2.774 ACCACAAA 19 6.816 ACCACAAA 19 6.816 ACCCCCAA 19 5.108 ACCCCCAA 19 5.108 ACCGCGAA 19 7.753 ACCGCGAA 19 7.753 ACCTCGAA 19 10.154 ACCTCGAA 19 10.154 ACCTCGAA 19 10.154 ACCTCGAA 19 10.154 ATCTCGAA 19 9.789 GTCTTGAA 19 8.646 GTCTTGGA 19 7.674 GTCTTTGG 19 6.198 GTCTTTGG 19 6.198 GTCTTTGG 19 6.198 GTCTTTGG 19 6.198 GTGTTTGG 19 1.783 GTTTTTGG 19 2.857 ******** MAP Score: 0.000000 Log-odds matrix for Motif 20 arra...ayr.TG.a (84) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.666 0.274 0.586 0.943 0.253 -0.993 0.277 1.123 -2.928 1.263 0.738 -2.774 -0.772 -0.824 0.934 #C -2.242 -0.998 -2.612 -0.988 -1.056 0.602 -1.500 -2.946 0.378 -2.451 0.215 -1.671 -8.779 -0.481 -0.671 #T -0.048 -1.941 -0.832 -0.406 -0.023 0.642 -0.640 -0.668 1.160 -4.605 -1.205 1.467 -4.075 0.278 -1.735 #G -0.385 1.310 0.782 -2.030 0.255 -1.452 0.939 -1.406 -5.455 0.003 -0.620 -9.365 2.170 0.760 -0.027 Sequence Logo # --------------- # -- 2.30 bits # # # G # TG # A TG # A ATA TG A # AG A TGATAATG A -- 0.29 bits # --------------- # arra...ayr.TG.a Gamma: 0.54716 Motif 20 arra...ayr.TG.a (84) (Bits: 7.68 MAP: 0.00 D: 0.320 3) E: 5.617 ch: 8.72 f: 0.20 Ra: 0.5706 AAAAAAAACAACAAA 20 3.175 AAAAAAAACAACAAA 20 3.175 AAAAACAACAAGGCA 20 0.361 AAAAACAACAATGCA 20 11.193 AAAAACAACAATGCA 20 11.193 ACAAACAACAATGCA 20 9.921 ACAACCCACAATGGA 20 8.076 ACCACCGACAATGGA 20 7.317 AGGACCGATACTGGA 20 13.278 CGGAGCGATACTGGA 20 11.681 GGGAGGGATACTGGC 20 9.879 GGGCGGGATACTGGC 20 7.948 GGGCGTGATACTGGC 20 10.042 GGGCGTGCTCCTGGG 20 2.903 GGGGGTGGTGCTGTG 20 5.373 TGGGTTGGTGGTGTG 20 4.597 TGGTTTGGTGGTGTG 20 6.221 TGGTTTTTTGGTGTG 20 5.38 TGTTTTTTTGTTGTG 20 3.181 TTTTTTTTTGTTGTT 20 -1.778 *************** MAP Score: 0.000000 Log-odds matrix for Motif 21 mA.rarmwACGTCAR (10) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.844 1.517 0.048 0.097 0.828 0.793 0.795 0.516 1.337 -9.432 -3.962 -0.937 -9.262 1.459 0.003 #C 0.815 -1.306 -0.799 -9.776 -6.698 -1.483 0.720 -9.963 -8.882 2.508 -9.858 -9.841 2.444 -9.937 -9.949 #T -9.697 -9.631 0.435 -0.300 -0.129 -9.800 -1.181 0.724 -1.953 -9.269 -9.498 1.355 -2.897 -1.594 -9.948 #G -0.696 -9.929 -0.489 1.148 -0.479 1.093 -5.122 -9.549 -0.868 -9.536 2.479 -9.963 -8.751 -9.939 1.941 Sequence Logo # --------------- # CG C -- 2.30 bits # CG C # CG C # CG C # A CG CAG # A ACGTCAG # A A ACGTCAG # AA GAGATACGTCAG -- 0.29 bits # --------------- # mA.rarmwACGTCAR Gamma: 0.15545 Motif 21 mA.rarmwACGTCAR (10) (Bits: 15.56 MAP: 0.00 D: 0.240 13) E: 5.429 ch: 5.72 f: 0.08 Ra: 0.5362 AAAAAAAAACGACAA 21 14.731 AAAAAAAAACGACAA 21 14.731 AAAAAAAAACGACAA 21 14.731 AAAAAAAAACGTCAA 21 17.023 AAAAAAAAACGTCAG 21 18.961 AACGAAAAACGTCAG 21 19.165 AACGAAAAACGTCAG 21 19.165 AACGAAAAACGTCAG 21 19.165 AACGACAAACGTCAG 21 16.889 CAGGACCTACGTCAG 21 17.303 CAGGGGCTACGTCAG 21 18.572 CAGGGGCTACGTCAG 21 18.572 CAGGGGCTACGTCAG 21 18.572 CATGGGCTACGTCAG 21 19.496 CATGGGCTACGTCAG 21 19.496 CATGTGCTGCGTCAG 21 17.641 CATTTGCTGCGTCAG 21 16.193 GATTTGCTGCGTCAG 21 14.682 GCTTTGTTGCGTCTG 21 6.905 GCTTTGTTTCGTCTG 21 5.82 *************** MAP Score: 0.000000 Log-odds matrix for Motif 22 WwAyGwCAkTAtKwm (8) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.016 0.436 1.623 -9.960 -9.869 0.153 -9.882 1.444 -9.906 -2.124 1.623 -0.585 -9.955 0.872 0.323 #C -9.966 -9.936 -8.955 1.757 -9.966 -9.907 2.509 -9.963 -9.966 -9.944 -9.949 -9.967 -9.564 -9.967 1.442 #T 0.084 0.789 -9.857 0.323 -1.231 0.978 -9.675 -1.475 0.422 1.512 -9.743 1.061 0.036 0.324 -1.470 #G -9.947 -9.959 -9.963 -9.967 2.294 -9.964 -9.945 -9.692 1.685 -9.811 -9.319 -0.718 1.925 -9.960 -9.967 Sequence Logo # --------------- # C -- 2.30 bits # C # G C # A G C A # A G CA TA G # ACG CAGTA G # A ACGTCAGTATG C # ATACGTCAGTATGAC -- 0.29 bits # --------------- # WwAyGwCAkTAtKwm Gamma: 0.14567 Motif 22 WwAyGwCAkTAtKwm (8) (Bits: 18.13 MAP: 0.00 D: 0.230 16) E: 5.321 ch: 6.67 f: 0.06 Ra: 0.5284 AAACGACAGAAAGAA 22 14.951 AAACGACAGTAAGAA 22 18.587 AAACGACAGTAAGAA 22 18.587 AAACGACAGTAAGAA 22 18.587 AAACGACAGTAGGAA 22 18.454 AAACGACAGTAGGAA 22 18.454 AAACGACAGTAGGAC 22 19.573 AAACGTCAGTATGAC 22 22.177 AAACGTCAGTATGAC 22 22.177 ATACGTCAGTATGAC 22 22.53 ATACGTCAGTATGAC 22 22.53 ATACGTCAGTATGAC 22 22.53 ATACGTCAGTATGTC 22 21.982 TTACGTCAGTATGTC 22 21.05 TTACGTCATTATGTC 22 19.787 TTATGTCATTATGTC 22 18.353 TTATGTCATTATTTC 22 16.464 TTATGTCATTATTTC 22 16.464 TTATGTCTTTATTTC 22 13.545 TTATTTCTTTATTTT 22 7.108 *************** MAP Score: 0.000000 Log-odds matrix for Motif 23 aywTacca.atrtkr (80) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.233 -1.382 0.291 -2.410 1.226 -0.300 -3.384 1.076 -0.340 1.121 -1.892 0.635 -0.102 -1.875 0.166 #C -2.787 1.127 -2.886 -0.672 -9.473 1.311 1.682 -1.125 0.895 -0.272 -0.130 -2.944 -0.009 -2.592 -5.614 #T -1.593 0.561 0.358 1.344 -0.931 -0.165 -0.128 -1.662 0.029 -6.161 0.925 -0.156 0.553 1.110 0.096 #G -0.747 -3.691 -0.102 -5.149 -1.306 -3.939 -0.692 -0.398 -1.027 -0.282 -0.367 0.053 -1.893 0.053 0.702 Sequence Logo # --------------- # -- 2.30 bits # # # # # A TA C # A TA CA A T # AC TACCACATA T -- 0.29 bits # --------------- # aywTacca.atrtkr Gamma: 0.53080 Motif 23 aywTacca.atrtkr (80) (Bits: 7.67 MAP: 0.00 D: 0.370 5) E: 5.274 ch: 2.44 f: 0.13 Ra: 0.5518 AAAAAACAAAAAAAA 23 -0.871 ACACAACAAACAACA 23 4.421 ACACAACAAACAAGA 23 7.066 ACACAACACACAAGA 23 8.301 ACACACCACACAAGA 23 9.912 ACATACCACACACGA 23 12.021 ACATACCACAGACGG 23 12.32 ACGTACCACAGACGG 23 11.927 ACGTACCACAGACTG 23 12.984 ACGTACCACAGGCTG 23 12.402 ACGTACCACATGCTG 23 13.694 ACGTACCACCTGGTG 23 10.417 ACGTACCCCCTGTTG 23 10.662 ATTTACCCGCTGTTG 23 8.634 CTTTACGGGCTGTTG 23 2.967 GTTTGCGGTCTTTTT 23 2.716 GTTTGTGGTGTTTTT 23 1.23 GTTTTTTGTGTTTTT 23 2.169 TTTTTTTGTGTTTTT 23 1.323 TTTTTTTTTGTTTTT 23 0.059 *************** MAP Score: 0.000000 Log-odds matrix for Motif 24 .rT..ya.rtmt..A (81) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.350 0.863 -8.929 0.617 0.663 -8.325 1.272 -0.013 0.396 -1.951 0.746 -0.184 0.656 -0.118 1.506 #C -0.876 0.098 -1.080 0.557 -0.389 1.578 -3.469 -1.558 -2.584 -0.042 0.986 -0.036 0.317 1.030 -8.603 #T 0.001 -4.206 1.494 -1.369 -0.447 0.547 -3.390 0.381 -0.602 0.909 -2.638 0.741 -1.138 -0.720 -7.377 #G -0.080 0.220 -6.261 -0.569 -0.620 -7.993 -0.047 0.162 0.911 -0.365 -1.650 -7.644 -0.520 -0.269 -1.210 Sequence Logo # --------------- # -- 2.30 bits # # # # T A # T A A # T CA A A # ATAACA GTCTACA -- 0.29 bits # --------------- # .rT..ya.rtmt..A Gamma: 0.53450 Motif 24 .rT..ya.rtmt..A (81) (Bits: 7.87 MAP: 0.00 D: 0.330 6) E: 5.006 ch: 3.17 f: 0.25 Ra: 0.5789 AACAACAAAAAAAAA 24 5.301 AACAACAAACAAAAA 24 7.21 AACAACAAACAAAAA 24 7.21 AATAACAAACAAAAA 24 9.784 AATAACAAACAAACA 24 10.932 AATAACACACACACA 24 9.535 AATAACACCGACACA 24 6.232 CATCACAGGGACACA 24 10.161 CATCCCAGGGCCCCA 24 9.01 CCTCCCAGGGCCCCA 24 8.245 GCTCCCAGGTCCCCA 24 10.315 GCTCCCAGGTCTCCA 24 11.092 GCTCCCAGGTCTCCA 24 11.092 GCTCGCATGTCTCCA 24 11.08 GGTCGTGTGTCTGGA 24 6.716 TGTGGTGTGTCTGGA 24 5.671 TGTGTTGTGTCTGGA 24 5.844 TGTGTTGTTTCTGGA 24 4.331 TGTGTTGTTTGTTTG 24 -2.09 TGTTTTGTTTGTTTG 24 -2.89 *************** MAP Score: 0.000000 Log-odds matrix for Motif 25 aATGk.Aw (83) # 0 1 2 3 4 5 6 7 #A 1.143 1.318 -4.828 -2.505 -1.532 0.702 1.353 0.406 #C -1.332 -2.129 -2.527 -8.816 -0.899 0.185 -7.035 -0.546 #T -2.721 -4.036 1.560 -6.578 0.667 -0.743 -2.057 0.276 #G -0.092 -0.423 -6.936 2.419 0.665 -1.155 -0.936 -1.620 Sequence Logo # -------- # -- 2.30 bits # G # G # TG # TG # ATG A # AATG A # AATGTAA -- 0.29 bits # -------- # aATGk.Aw Gamma: 0.54471 Motif 25 aATGk.Aw (83) (Bits: 6.76 MAP: 0.00 D: 0.230 8) E: 4.757 ch: 2.01 f: 0.92 Ra: 0.6640 AACGAAAA 25 3.282 AATGCAAA 25 8.002 AATGCAAA 25 8.002 AATGCAAA 25 8.002 AATGGAAA 25 9.566 AATGGAAA 25 9.566 AATGGAAA 25 9.566 AATGGAAC 25 8.614 AATGGCAC 25 8.097 AATGGCAC 25 8.097 AATGGCAC 25 8.097 AATGGCAG 25 7.023 CATGTCAG 25 4.55 CATGTCAT 25 6.446 GCTGTCAT 25 4.239 GCTGTGAT 25 2.899 GGTGTGGT 25 2.316 GGTGTTGT 25 2.728 GGTGTTGT 25 2.728 GGTGTTTT 25 1.607 ******** MAP Score: 0.000000 Log-odds matrix for Motif 26 rtGTAAat (83) # 0 1 2 3 4 5 6 7 #A 0.891 -7.278 -0.316 -3.577 1.546 1.471 0.939 -0.068 #C -1.234 -0.394 -7.327 -1.692 -2.053 -3.139 -0.702 -0.452 #T -2.846 1.276 -7.541 1.434 -5.716 -3.840 -0.301 0.704 #G 0.665 -1.158 2.069 -2.075 -5.375 -1.598 -4.709 -2.378 Sequence Logo # -------- # -- 2.30 bits # # # G A # GTAA # TGTAA # TGTAAA # ATGTAAAT -- 0.29 bits # -------- # rtGTAAat Gamma: 0.54349 Motif 26 rtGTAAat (83) (Bits: 7.65 MAP: 0.00 D: 0.180 13) E: 4.653 ch: 3.56 f: 0.79 Ra: 0.6559 ACACAAAA 26 2.377 ACACAAAA 26 2.377 ACAGAAAA 26 1.994 ACGTAAAA 26 7.888 AGGTAAAA 26 7.124 AGGTAAAC 26 6.74 AGGTAAAC 26 6.74 ATGTAAAC 26 9.174 ATGTAAAC 26 9.174 CTGTAAAC 26 7.049 CTGTAAAG 26 5.123 GTGTAACT 26 8.463 GTGTAACT 26 8.463 GTGTAACT 26 8.463 GTGTAACT 26 8.463 GTGTAATT 26 8.864 GTGTAATT 26 8.864 GTGTACTT 26 4.254 GTGTAGTT 26 5.795 GTGTCGTT 26 2.196 ******** MAP Score: 0.000000 Log-odds matrix for Motif 27 arwrk.ratr.yr.y (82) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.911 0.722 0.005 1.163 -8.701 0.094 0.630 0.700 -1.976 0.872 0.578 -2.965 0.548 -3.344 -1.047 #C -0.893 -2.104 -0.931 -9.418 -0.677 0.795 -4.944 -1.063 -0.219 -3.197 0.761 1.048 -9.070 0.324 1.207 #T -0.378 -1.088 0.818 -2.733 0.989 -0.983 -0.273 -0.352 1.213 -9.255 -1.426 0.446 -1.772 0.350 0.377 #G -1.944 0.629 -4.110 0.355 0.485 0.075 0.350 -0.382 -3.566 1.138 -0.850 -0.194 1.293 0.931 -3.417 Sequence Logo # --------------- # -- 2.30 bits # # # # # T # AT TA # AATAT AATG CGGC -- 0.29 bits # --------------- # arwrk.ratr.yr.y Gamma: 0.53700 Motif 27 arwrk.ratr.yr.y (82) (Bits: 6.95 MAP: 0.00 D: 0.420 15) E: 4.585 ch: 0.11 f: 0.19 Ra: 0.5634 AAAACAAAAAACACA 27 3.895 AAAACAAACAACACA 27 5.652 AAAACAAACAACACC 27 7.906 AAAAGAAACAACACC 27 9.068 AAAAGAAACAACACC 27 9.068 AAAAGCAACAACACC 27 9.769 AACAGCAAGAACAGC 27 6.093 AACAGCAATACCGGC 27 11.8 ACCAGCCATACCGGC 27 3.4 ACTAGCGCTGCCGGC 27 8.946 AGTATCGCTGCGGGC 27 10.941 CGTATCGCTGCGGGC 27 9.137 CGTGTCGGTGCGGGC 27 9.01 CGTGTGGGTGCGGGC 27 8.29 GGTGTGGGTGCTGGT 27 7.049 GGTGTGGGTGCTGTT 27 6.468 TGTGTGTTTGGTGTT 27 5.83 TGTGTGTTTGGTGTT 27 5.83 TTTGTTTTTGGTGTT 27 3.055 TTTGTTTTTGTTTTT 27 -0.586 *************** MAP Score: 0.000000 Log-odds matrix for Motif 28 agcAmAsCtywAATm (6) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.170 -2.693 -0.150 1.623 0.952 1.381 -1.277 -8.299 -1.176 -1.075 0.217 1.622 1.620 -7.393 0.343 #C -9.815 -0.592 1.605 -9.646 0.244 -9.801 1.584 2.228 -9.548 1.390 -0.630 -9.958 -8.602 -7.197 1.411 #T -1.053 -1.075 -1.074 -9.717 -0.982 -1.073 -3.911 -1.061 1.109 0.249 0.650 -8.732 -7.662 1.619 -5.370 #G -0.631 1.952 -3.176 -9.423 -9.833 -9.004 0.858 -3.070 -0.167 -9.620 -9.390 -8.255 -7.691 -9.905 -0.625 Sequence Logo # --------------- # -- 2.30 bits # # C # A C AAT # G A A C AAT # G A A C AAT # AGCAAACCTC AATC # AGCAAACCTCTAATC -- 0.29 bits # --------------- # agcAmAsCtywAATm Gamma: 0.13446 Motif 28 agcAmAsCtywAATm (6) (Bits: 15.19 MAP: 0.00 D: 0.220 8) E: 4.580 ch: 3.17 f: 0.05 Ra: 0.5237 ACAAAAACAAAAATA 28 8.505 ACAAAACCAAAAATA 28 11.366 ACAAAACCGCAAATA 28 14.84 AGAAAACCGCAAATA 28 17.384 AGCAAACCGCAAATA 28 19.139 AGCAAACCGCAAATC 28 20.207 AGCAAACCGCAAATC 28 20.207 AGCAAACCGCCAATC 28 19.36 AGCAAACCTCCAATC 28 20.636 AGCAAACCTCCAATC 28 20.636 AGCAAACCTCCAATC 28 20.636 AGCACACCTCTAATC 28 21.208 AGCACACCTCTAATC 28 21.208 GGCACAGCTCTAATC 28 18.681 GGCACAGCTCTAATC 28 18.681 GGCACAGCTTTAATC 28 17.54 GGCACAGCTTTAATC 28 17.54 GGCACTGCTTTAATG 28 13.05 TGTATTGGTTTAATG 28 3.425 TTTATTGTTTTAATG 28 2.407 *************** MAP Score: 0.000000 Log-odds matrix for Motif 29 .GTawytA (82) # 0 1 2 3 4 5 6 7 #A 0.417 -1.597 -6.299 1.167 0.002 -1.942 -0.833 1.410 #C -1.804 -5.698 -1.476 -2.112 -1.648 0.277 -3.353 -1.930 #T -0.466 -5.787 1.432 -2.330 0.928 1.033 1.006 -2.346 #G 0.683 2.331 -1.609 -0.079 -6.700 -2.166 -0.238 -2.649 Sequence Logo # -------- # -- 2.30 bits # G # G # G # GT A # GT A # GTA TTA # GTATTTA -- 0.29 bits # -------- # .GTawytA Gamma: 0.54124 Motif 29 .GTawytA (82) (Bits: 6.56 MAP: 0.00 D: 0.200 3) E: 4.316 ch: 0.03 f: 0.74 Ra: 0.6414 AACAAAAA 29 -2.852 AGCAACAA 29 3.295 AGGAACAA 29 3.162 AGGAACGA 29 3.757 AGTAACGA 29 6.798 AGTAACGA 29 6.798 AGTACCGA 29 5.148 CGTACCGA 29 2.927 GGTATGGA 29 5.547 GGTATTTA 29 9.99 GGTATTTA 29 9.99 GGTATTTA 29 9.99 GGTATTTA 29 9.99 GGTCTTTA 29 6.711 GGTGTTTA 29 8.744 GGTGTTTA 29 8.744 GGTGTTTA 29 8.744 TGTGTTTC 29 4.255 TGTGTTTG 29 3.536 TGTTTTTT 29 1.588 ******** MAP Score: 0.000000 Log-odds matrix for Motif 30 MattAAka (81) # 0 1 2 3 4 5 6 7 #A 1.184 1.224 -1.260 -1.242 1.379 1.332 -0.891 1.120 #C 0.513 -3.667 -1.282 -1.909 -2.836 -4.882 -3.546 -0.287 #T -6.204 -1.843 1.251 1.296 -4.143 -2.908 0.451 -1.326 #G -4.437 -0.350 -3.103 -3.157 -0.634 -0.386 1.062 -3.020 Sequence Logo # -------- # -- 2.30 bits # # # # A # AATTAA # AATTAA A # AATTAAGA -- 0.29 bits # -------- # MattAAka Gamma: 0.53403 Motif 30 MattAAka (81) (Bits: 6.92 MAP: 0.00 D: 0.190 14) E: 4.196 ch: 1.94 f: 0.74 Ra: 0.6333 AAAAAAAA 30 2.846 AAAAAAAA 30 2.846 AACCAACA 30 -0.498 AACCAAGA 30 4.11 AACGAAGA 30 2.862 AATTAAGA 30 9.848 AATTAAGA 30 9.848 AATTAAGA 30 9.848 AATTAAGA 30 9.848 AATTAAGA 30 9.848 AATTAAGA 30 9.848 AATTAAGA 30 9.848 CATTAAGC 30 7.77 CATTAATC 30 7.159 CGTTAATC 30 5.585 CGTTCGTC 30 -0.348 CGTTGGTC 30 1.854 CGTTGGTG 30 -0.879 CGTTGGTT 30 0.815 CTTTGGTT 30 -0.678 ******** MAP Score: 0.000000 Log-odds matrix for Motif 31 yyr.TaTa (82) # 0 1 2 3 4 5 6 7 #A -4.349 -0.263 0.997 -0.083 -2.807 1.269 -5.969 1.256 #C 1.861 0.334 -5.191 -2.429 -1.464 -1.380 -0.952 -1.850 #T 0.093 0.537 -7.537 0.085 1.454 -3.520 1.476 -3.538 #G -9.213 -2.219 0.979 0.853 -7.019 -0.520 -6.733 -0.240 Sequence Logo # -------- # -- 2.30 bits # # # # C T T # C A TATA # C A TATA # C G TATA -- 0.29 bits # -------- # yyr.TaTa Gamma: 0.54031 Motif 31 yyr.TaTa (82) (Bits: 6.80 MAP: 0.00 D: 0.240 4) E: 4.039 ch: 5.32 f: 0.85 Ra: 0.6471 CAAACACA 31 2.621 CAAACACA 31 2.621 CAAACACA 31 2.621 CAAATATA 31 7.967 CCACTATA 31 6.218 CCAGTATA 31 9.5 CCAGTATA 31 9.5 CCAGTATA 31 9.5 CCAGTATA 31 9.5 CCAGTATA 31 9.5 CCGGTATA 31 9.482 CGGGTATA 31 6.929 CTGGTATA 31 9.685 CTGGTATC 31 6.579 CTGGTCTC 31 3.93 CTGTTCTG 31 4.772 TTGTTGTG 31 3.864 TTGTTGTG 31 3.864 TTGTTGTG 31 3.864 TTGTTGTG 31 3.864 ******** MAP Score: 0.000000 Log-odds matrix for Motif 32 AACAwata (83) # 0 1 2 3 4 5 6 7 #A 1.557 1.349 -2.706 1.374 0.180 0.948 -1.165 1.218 #C -3.812 -3.311 2.410 -3.102 -1.583 -1.478 -0.562 -3.368 #T -3.556 -4.216 -4.303 -1.518 0.652 -0.594 0.868 -2.130 #G -4.988 -0.345 -8.658 -2.782 -1.458 -0.872 -0.283 -0.188 Sequence Logo # -------- # -- 2.30 bits # C # C # A C # A CA # AACA A # AACA A A # AACATATA -- 0.29 bits # -------- # AACAwata Gamma: 0.54249 Motif 32 AACAwata (83) (Bits: 7.38 MAP: 0.00 D: 0.170 16) E: 3.892 ch: 3.13 f: 0.81 Ra: 0.6503 AACAAAAA 32 7.871 AACAAAAA 32 7.871 AACAAACA 32 8.474 AACAAACA 32 8.474 AACAAACA 32 8.474 AACAAACA 32 8.474 AACACAGA 32 6.99 AACACAGA 32 6.99 AACACAGA 32 6.99 AACAGAGA 32 7.115 AACAGATA 32 8.266 AACATCTA 32 7.95 AACATCTA 32 7.95 AACATGTC 32 3.97 AACATGTG 32 7.15 AGCATGTG 32 5.456 AGCCTGTG 32 0.98 AGCGTTTG 32 1.578 AGCTTTTG 32 2.842 CGCTTTTT 32 0.132 ******** MAP Score: 0.000000 Log-odds matrix for Motif 33 rtRTR.yA (81) # 0 1 2 3 4 5 6 7 #A 1.188 -1.373 1.086 -4.321 1.325 0.576 -4.324 1.356 #C -3.523 -0.165 -9.356 -1.414 -9.200 -0.542 0.694 -6.865 #T -4.805 0.997 -8.814 1.490 -8.599 -0.756 1.040 -2.294 #G 0.413 -1.317 0.822 -4.685 0.083 0.213 -2.435 -0.788 Sequence Logo # -------- # -- 2.30 bits # # # # T # A TA A # ATATA TA # ATATA TA -- 0.29 bits # -------- # rtRTR.yA Gamma: 0.53211 Motif 33 rtRTR.yA (81) (Bits: 7.10 MAP: 0.00 D: 0.240 19) E: 3.721 ch: 0.64 f: 0.95 Ra: 0.6538 AAACAACA 33 3.438 AAACAACA 33 3.438 ACATAACA 33 7.55 ACATAACA 33 7.55 ACATAACA 33 7.55 ACATAACA 33 7.55 ACATAACA 33 7.55 AGATACCA 33 5.28 AGATACGA 33 2.151 ATATACTA 33 7.94 ATATACTA 33 7.94 ATGTAGTA 33 8.431 CTGTAGTA 33 3.72 GTGTAGTA 33 7.656 GTGTGGTA 33 6.414 GTGTGGTA 33 6.414 GTGTGGTG 33 4.27 GTGTGTTG 33 3.301 GTGTGTTG 33 3.301 GTGTGTTT 33 1.795 ******** MAP Score: 0.000000 Log-odds matrix for Motif 34 w..mtsrcRy.tsty (61) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.555 -1.041 -0.081 0.660 -0.228 -0.646 0.710 -6.534 0.054 -0.414 0.538 -0.299 -6.588 -0.061 -8.377 #C -3.768 0.469 0.498 0.681 -1.236 0.734 -9.050 2.061 -9.630 0.451 -0.907 -1.087 1.476 -0.106 1.687 #T 0.556 0.571 -0.662 -0.658 0.921 -3.851 -0.761 -0.862 -9.536 0.621 -0.377 1.010 -0.370 0.665 0.228 #G -2.401 -0.581 0.453 -8.810 -2.357 1.445 0.660 -1.040 1.916 -3.337 0.080 -9.432 0.550 -3.914 -1.707 Sequence Logo # --------------- # -- 2.30 bits # # # C # CG # CG C # G CG TC C # ATGACGT TCTC -- 0.29 bits # --------------- # w..mtsrcRy.tsty Gamma: 0.42464 Motif 34 w..mtsrcRy.tsty (61) (Bits: 7.18 MAP: 0.00 D: 0.370 4) E: 3.682 ch: 3.17 f: 0.14 Ra: 0.5481 AAAAAAACAAAACAC 34 4.971 AAAAAAACAAAACAC 34 4.971 ACAAACACAAAACAC 34 7.861 ACAAACACAAAACAC 34 7.861 ACCAACACGCAACAC 34 11.167 ACCACCACGCACCCC 34 9.326 ACCACCACGCACCCC 34 9.326 ACCAGCACGCCCCCC 34 6.76 ACCCGCACGCCTCCC 34 8.878 CGCCTGGCGCCTCCC 34 7.444 GGCCTGGCGCGTCCC 34 9.798 TGGCTGGCGGGTGTC 34 8.767 TGGCTGGCGTGTGTC 34 12.725 TTGCTGGCGTGTGTC 34 13.877 TTGCTGGCGTGTGTG 34 10.483 TTGCTGGCGTGTGTT 34 12.418 TTGCTGGGGTTTGTT 34 8.86 TTTTTGTGGTTTTTT 34 4.065 TTTTTGTTGTTTTTT 34 4.243 TTTTTGTTGTTTTTT 34 4.243 *************** MAP Score: 0.000000 Log-odds matrix for Motif 35 .rtGT..yRwgwt.r (83) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 0.183 0.734 -3.569 -0.139 -7.058 0.562 0.104 -3.032 1.265 0.192 -0.665 0.092 -0.102 -1.131 0.219 #C -1.320 -0.734 -0.614 -8.023 -0.496 -1.207 -1.259 0.850 -2.964 -2.371 -4.315 -1.223 -6.331 -0.351 0.001 #T 0.139 -1.714 1.285 -9.065 1.377 -0.332 -0.033 0.756 -5.186 0.438 -0.028 0.640 0.768 0.670 -8.195 #G 0.218 0.544 -1.386 2.004 -2.518 0.092 0.572 -0.873 0.105 -0.170 1.416 -1.260 -0.294 0.174 1.344 Sequence Logo # --------------- # -- 2.30 bits # # # # GT # TGT A # TGT A G G # ATGT TA GTTTG -- 0.29 bits # --------------- # .rtGT..yRwgwt.r Gamma: 0.54162 Motif 35 .rtGT..yRwgwt.r (83) (Bits: 7.42 MAP: 0.00 D: 0.350 11) E: 4.096 ch: 1.79 f: 0.20 Ra: 0.5632 AACACAACAAAAAAA 35 1.054 AACACAACAAAAAAA 35 1.054 AACACAACAAAAACA 35 1.834 AACGCAACAAGAACA 35 6.058 AAGGGAACAAGAACA 35 3.264 AAGGTACCAAGAGCC 35 5.386 CATGTACCACGCGGC 35 3.201 CATGTAGCAGGCGGC 35 7.233 GCTGTCGCAGGCGGC 35 5.534 GCTGTCGGAGGGGGG 35 5.117 GCTGTGGGAGGGTGG 35 7.478 GGTGTGGGAGGTTGG 35 10.656 GGTGTGGTAGGTTTG 35 12.781 GGTGTGGTCTGTTTG 35 9.16 TGTGTGGTGTGTTTG 35 12.15 TGTGTGTTGTGTTTG 35 11.545 TGTGTTTTGTTTTTG 35 9.677 TGTGTTTTGTTTTTG 35 9.677 TGTGTTTTGTTTTTG 35 9.677 TTTGTTTTGTTTTTG 35 7.419 *************** MAP Score: 0.000000 Log-odds matrix for Motif 36 AyTkACGtATCwcrT (9) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.455 -8.387 -1.440 -9.692 1.450 -2.683 -0.485 -1.023 1.163 -0.980 -7.484 0.143 -0.942 1.009 -9.195 #C -0.694 1.557 -7.276 -3.210 -9.878 2.321 -9.865 -0.552 -9.301 -9.109 2.204 -0.659 1.829 -0.573 -8.213 #T -7.603 0.564 1.438 0.081 -1.536 -2.171 -9.365 0.961 -0.251 1.362 -0.778 0.709 -0.795 -9.864 1.435 #G -8.683 -6.018 -9.725 1.860 -7.020 -9.210 2.128 -0.976 -8.357 -6.873 -9.164 -9.647 -3.108 0.381 -0.532 Sequence Logo # --------------- # -- 2.30 bits # C # C C # CG C # A TGACG C T # A TGACG TC C T # ACTGACGTATC CAT # ACTGACGTATCTCAT -- 0.29 bits # --------------- # AyTkACGtATCwcrT Gamma: 0.14859 Motif 36 AyTkACGtATCwcrT (9) (Bits: 15.54 MAP: 0.00 D: 0.190 14) E: 3.209 ch: 5.72 f: 0.03 Ra: 0.5145 ACAGACAAAACAAAG 36 7.76 ACAGACAAAACAAAG 36 7.76 ACTGACGCAACACAG 36 16.493 ACTGACGCATCACAG 36 18.835 ACTGACGCATCACAT 36 20.802 ACTGACGCATCACAT 36 20.802 ACTGACGGATCCCAT 36 19.576 ACTGACGGATCCCAT 36 19.576 ACTGACGGATCCCAT 36 19.576 ACTGACGTATCCCAT 36 21.513 ACTGACGTATCTCCT 36 21.299 ACTGACGTATCTCCT 36 21.299 ACTGACGTATCTCCT 36 21.299 AGTGACGTATCTCCT 36 13.724 ATTGACGTATCTCGT 36 21.26 ATTGACGTTTCTCGT 36 19.846 ATTTACGTTTCTCGT 36 18.067 CTTTACGTTTCTGGT 36 10.981 CTTTTCGTTTTTTGT 36 7.326 CTTTTCGTTTTTTGT 36 7.326 *************** MAP Score: 0.000000 Log-odds matrix for Motif 37 AttAT.aa (80) # 0 1 2 3 4 5 6 7 #A 1.367 -2.181 -2.405 1.307 -5.664 -0.820 1.276 1.180 #C -5.835 -1.149 -0.426 -7.135 -0.472 1.514 -2.163 -2.478 #T -4.182 1.248 1.280 -2.667 1.398 -1.244 -1.924 -0.856 #G -0.302 -1.153 -3.111 -0.276 -3.871 0.017 -0.974 -1.695 Sequence Logo # -------- # -- 2.30 bits # # # # T # ATTAT AA # ATTATCAA # ATTATCAA -- 0.29 bits # -------- # AttAT.aa Gamma: 0.52965 Motif 37 AttAT.aa (80) (Bits: 6.98 MAP: 0.00 D: 0.160 18) E: 3.064 ch: 2.78 f: 0.58 Ra: 0.6087 AAAACAAA 37 -0.748 ACCACAAA 37 2.263 ACCACCAA 37 4.597 ACCACCAA 37 4.597 AGCATCAA 37 6.463 AGGATCAA 37 3.778 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTATCAA 37 10.57 ATTCTGCC 37 -4.845 GTTGTGCG 37 -0.493 GTTGTGGG 37 0.696 GTTGTGGT 37 1.535 GTTGTGGT 37 1.535 GTTGTTTT 37 -0.676 ******** MAP Score: 0.000000 Log-odds matrix for Motif 38 AcatgAAA (42) # 0 1 2 3 4 5 6 7 #A 1.442 -1.419 1.279 -1.828 -1.261 1.433 1.509 1.465 #C -2.020 2.087 -2.385 -0.575 -2.248 -2.690 -2.138 -1.764 #T -2.302 -1.656 -2.790 1.176 -1.432 -2.895 -4.809 -3.762 #G -4.168 -2.555 -0.412 -1.612 2.011 -1.721 -2.812 -2.616 Sequence Logo # -------- # -- 2.30 bits # # # C # AC GAAA # ACA GAAA # ACATGAAA # ACATGAAA -- 0.29 bits # -------- # AcatgAAA Gamma: 0.32441 Motif 38 AcatgAAA (42) (Bits: 8.20 MAP: 0.00 D: 0.100 12) E: 1.751 ch: 3.66 f: 0.54 Ra: 0.5754 AAAAAAAA 38 2.62 ACACCAAA 38 6.392 ACACGAAA 38 10.651 ACACGAAA 38 10.651 ACACGAAA 38 10.651 ACAGGAAA 38 9.614 ACAGGAAA 38 9.614 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACATGAAA 38 12.402 ACCTGAAA 38 8.738 ACGTGAAA 38 10.711 ACGTGAAA 38 10.711 CCGTGCAC 38 -0.103 CGGTGGCC 38 -7.423 TTGTTGGG 38 -5.123 ******** MAP Score: 0.000000 Log-odds matrix for Motif 39 mAAatr.aaAA.arR (62) # 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 #A 1.230 1.396 1.413 1.062 -0.197 1.107 -0.744 1.142 1.285 1.399 1.472 0.415 0.968 1.121 1.291 #C 0.065 -0.516 -0.690 -1.367 -1.274 -2.036 0.164 -2.394 -1.312 -9.424 -6.498 0.528 -0.283 -5.064 -6.073 #T -4.727 -4.004 -3.909 -1.167 0.773 -2.406 0.464 -1.779 -2.028 -2.557 -2.063 -1.213 -1.338 -1.641 -7.712 #G -2.034 -5.691 -5.016 -0.675 -0.964 0.168 -0.116 -0.169 -1.574 -0.976 -3.100 -0.011 -0.923 0.075 0.202 Sequence Logo # --------------- # -- 2.30 bits # # # # AA AA # AAA AAA A # AAAA A AAAA AAA # AAAATA AAAA AAA -- 0.29 bits # --------------- # mAAatr.aaAA.arR Gamma: 0.43390 Motif 39 mAAatr.aaAA.arR (62) (Bits: 11.56 MAP: 0.00 D: 0.200 2) E: 0.366 ch: 1.51 f: 0.34 Ra: 0.5132 AAAAAAAAAAAAAAA 39 14.36 AAAAAAAAAAAAAAA 39 14.36 AAAAAAAAAAAAAAA 39 14.36 AAAAAACAAAAAAAA 39 15.268 AAAAAACAAAAAAAA 39 15.268 AAAACACAAAAAAAA 39 14.191 AAAACACAAAACAAA 39 14.304 AAAAGACAAAACAAA 39 14.614 AAAAGAGAAAACAAA 39 14.334 AAAAGAGAAAACAAA 39 14.334 AAAATAGAAAACAAA 39 16.071 AAAATAGAAAACCAA 39 14.82 AAACTCGCAAACCGA 39 4.666 CAACTGTCAAAGCGA 39 5.746 CAAGTGTGCAAGCGG 39 4.977 CAAGTGTGCAAGGGG 39 4.337 CCCGTGTGCGAGGGG 39 -2.053 CCCGTGTGGGAGGGG 39 -2.315 CCCTTGTGGGGTTGG 39 -8.996 GCCTTTTTTTTTTTG 39 2.894 *************** MAP Score: 0.000000