id chr start end assigned gene name distance (bp) Dl_Tl10b_DmWG_Max Dl_Tl10b_DmWG_PositionMax Twist_Tl10b_DmWG_Max Twist_Tl10b_DmWG_PositionMax Snail_Tl10b_DmWG_Max Snail_Tl10b_DmWG_PositionMax DTS high confidence TS high confidence DTS + TS high confidence known DV enhancer confirmed DV enhancer putative DV enhancer references sna site: 0% conservation sna site: 20% conservation sna site: 40% conservation sna site: 60% conservation sna site: 80% conservation sna site: 100% conservation twi site: 0% conservation twi site: 20% conservation twi site: 40% conservation twi site: 60% conservation twi site: 80% conservation twi site: 100% conservation dl site: 0% conservation dl site: 20% conservation dl site: 40% conservation dl site: 60% conservation dl site: 80% conservation dl site: 100% conservation 2L_27047_28475 2L 27047 28475 CG31973 CG31973 transcript overlap 1.546218487 27426 2.082483781 27157 3.705329154 27157 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_66885_67090 2L 66885 67090 CG11371 dbr TSS overlap 1.304621849 66995 2.010194625 66995 1.855799373 66995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_81166_81448 2L 81166 81448 CG11374 CG11374 4864 3.610294118 81269 1.627432808 81269 2.631138976 81269 0 0 0 0 0 0 3 3 3 0 0 0 2 2 2 2 0 0 0 0 0 0 0 0 2L_86570_87456 2L 86570 87456 CG11450 net TSS overlap 5.454831933 87356 3.241890639 86936 4.307210031 86936 0 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_89833_90645 2L 89833 90645 CG11450 net 2451 2.046218487 90222 5.733086191 90222 3.836990596 90222 1 0 1 0 0 0 3 1 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 2L_91177_92017 2L 91177 92017 CG11376 CG11376 2735 1.393907563 91847 3.822057461 91567 6.26645768 91567 0 1 1 0 0 0 0 0 0 0 0 0 3 2 1 1 0 0 1 0 0 0 0 0 2L_109021_109591 2L 109021 109591 CG2674 M(2)21AB transcript overlap 2.253151261 109102 2.34476367 109382 2.525600836 109501 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 1 0 0 0 0 0 0 0 0 2L_115859_116208 2L 115859 116208 CG13694 CG13694 TSS overlap 1.425420168 116108 3.575532901 116108 6.252873563 115969 0 1 1 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2L_124666_124917 2L 124666 124917 CG3164 CG3164 transcript overlap 1.193277311 124776 1.713623726 124776 2.556948798 124776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_155465_155874 2L 155465 155874 CG11455 CG11455 transcript overlap 2.463235294 155785 2.078776645 155785 2.715778474 155505 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_161628_162179 2L 161628 162179 CG18497 spen transcript overlap 1.878151261 161738 3.030583874 162013 2.322884013 161738 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2L_166390_166891 2L 166390 166891 CG18497 spen transcript overlap 1.825630252 166500 1.93141798 166500 2.121212121 166722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_222926_223727 2L 222926 223727 CG3696 kis transcript overlap 1.428571429 223036 2.645041705 223261 4.181818182 223261 0 0 0 0 0 0 1 1 1 1 1 1 2 2 1 1 1 1 0 0 0 0 0 0 2L_246839_247128 2L 246839 247128 CG3696 kis transcript overlap 2.25210084 247044 2.333642261 246872 2.792058516 246872 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_249789_250361 2L 249789 250361 CG3696 kis transcript overlap 2.328781513 250208 2.299351251 249897 4.206896552 249897 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 2L_265987_266265 2L 265987 266265 CG17075 CG3645 CG17075 CG3645 transcript overlap 0.706932773 266096 1.94068582 266096 2.444096134 266096 0 0 0 0 0 0 1 1 1 0 0 0 2 2 1 0 0 0 1 0 0 0 0 0 2L_272827_273371 2L 272827 273371 CG11604 CG11604 transcript overlap 1.323529412 273203 2.622798888 273203 5.234064786 273203 0 1 1 0 0 0 6 2 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 2L_277990_278805 2L 277990 278805 CG11561 smo transcript overlap 1.567226891 278641 2.614457831 278082 3.31661442 278082 0 0 0 0 0 0 5 2 2 0 0 0 2 1 1 0 0 0 1 1 1 1 1 0 2L_282329_282869 2L 282329 282869 CG11601 CG11601 transcript overlap 2.976890756 282430 3.937905468 282430 5.239289446 282430 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_321407_321599 2L 321407 321599 CG4574 Plc21C transcript overlap 1.31407563 321447 2.176088971 321447 2.650992685 321447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_355935_356743 2L 355935 356743 CG11907 Ent1 transcript overlap 1.566176471 356325 3.165894347 356325 4.907001045 356325 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_370631_371191 2L 370631 371191 CG3935 al 6925 1.352941176 370741 1.624652456 370741 2.89968652 370741 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_377655_378257 2L 377655 378257 CG3935 al TSS overlap 1.429621849 377763 3.311399444 378011 5.571577847 378011 0 1 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_441744_442262 2L 441744 442262 CG4114 ex transcript overlap 1.177521008 441854 2.574606117 441854 5.603970742 441854 0 1 1 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_518141_518651 2L 518141 518651 CG2762 ush 4816 2.225840336 518486 2.50231696 518486 3.712643678 518486 0 0 0 0 0 1 "Frank and Rushlow, 1996" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_544084_544361 2L 544084 544361 CG11840 Spp transcript overlap 0.910714286 544191 2.190917516 544191 3.08045977 544191 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_594761_594915 2L 594761 594915 CG2851 Gsc 74 1.823529412 594808 3.244670992 594808 1.401253918 594808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_667576_668136 2L 667576 668136 CG17941 ds transcript overlap 2.081932773 667686 2.670991659 667686 2.224660397 667686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_713310_713823 2L 713310 713823 CG17941 ds transcript overlap 0.755252101 713411 2.171455051 713411 2.846394984 713411 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_714813_715650 2L 714813 715650 CG17941 ds TSS overlap 1.914915966 714942 3.178869323 715222 5.293625914 715222 0 1 1 0 0 0 3 3 2 2 1 0 2 2 2 2 1 0 0 0 0 0 0 0 2L_825845_826094 2L 825845 826094 CG3727 dock TSS overlap 5.353991597 825877 2.145505097 825877 2.897596656 825877 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_849667_850820 2L 849667 850820 CG3365 drongo transcript overlap 2.018907563 850410 9.229842447 850057 19.5015674 850057 1 0 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_865689_865897 2L 865689 865897 CG4276 aru transcript overlap 1.777310924 865799 2.030583874 865799 2.686520376 865799 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_867463_868521 2L 867463 868521 CG4276 aru TSS overlap 1.620798319 867975 4.446709917 867975 7.785788924 867975 0 1 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 2L_901217_901704 2L 901217 901704 CR31656 snRNA:U1:21D TSS overlap 2.389705882 901327 1.788693234 901327 3.304075235 901602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_914162_914372 2L 914162 914372 CG4226 GluRIIC transcript overlap 3.129201681 914202 2.614457831 914202 2.593521421 914202 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_955175_955425 2L 955175 955425 CG4341 CG4341 transcript overlap 0.864495798 955285 9.383688601 955285 10.57784744 955285 0 1 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_1062806_1063327 2L 1062806 1063327 CG4385 S transcript overlap 1.714285714 1063195 3.816496756 1063195 3.755485893 1063195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_1065637_1067268 2L 1065637 1067268 CG4385 S transcript overlap 2.282563025 1066838 6.030583874 1066838 8.57784744 1066838 1 0 1 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 2L_1067819_1069122 2L 1067819 1069122 CG4385 S transcript overlap 2.277310924 1068644 5.869323448 1068644 7.773249739 1068644 1 0 1 0 0 0 2 2 2 2 2 0 4 3 3 3 2 0 2 1 0 0 0 0 2L_1075636_1077929 2L 1075636 1077929 CG4385 S TSS overlap 5.153361345 1076585 13.06580167 1076585 15.1400209 1076585 1 0 1 0 0 0 5 0 0 0 0 0 3 0 0 0 0 0 7 1 0 0 0 0 2L_1119214_1120201 2L 1119214 1120201 CG4710 smi21F transcript overlap 3.590336134 1119262 4.03429101 1120039 5.966562173 1120039 1 0 1 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2L_1404886_1405425 2L 1404886 1405425 CG5481 lea transcript overlap 1.804621849 1405255 1.873030584 1404991 2.673981191 1404991 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 2L_1410429_1411976 2L 1410429 1411976 CG5481 lea transcript overlap 2.864495798 1411089 5.400370714 1411089 7.124346917 1411089 1 0 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2 1 1 0 0 0 2L_1420037_1420593 2L 1420037 1420593 CG5481 lea TSS overlap 12.52731092 1420496 1.796107507 1420496 2.940438871 1420496 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_1421080_1422194 2L 1421080 1422194 CG5481 lea 631 1.412815126 1421728 3.555143652 1421728 5.597701149 1421728 0 1 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_1430418_1430957 2L 1430418 1430957 CR31927 snRNA:U3:22A 1754 1.68907563 1430525 1.793327155 1430525 2.702194357 1430525 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 0 0 0 3 1 0 0 0 0 2L_1438795_1439040 2L 1438795 1439040 CR31927 snRNA:U3:22A 6084 1.266806723 1438870 1.917516219 1438870 2.727272727 1438870 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_1460429_1461515 2L 1460429 1461515 CG31925 CG31925 12528 4.581932773 1461072 3.739573679 1461072 4.942528736 1461072 0 0 0 0 0 0 5 4 3 2 0 0 2 2 2 1 1 1 2 1 0 0 0 0 2L_1462066_1462861 2L 1462066 1462861 CG31925 CG31925 11182 3.007352941 1462453 4.469879518 1462453 3.320794148 1462453 0 0 0 0 0 0 2 2 2 2 1 1 2 2 2 2 1 1 2 1 1 0 0 0 2L_1474273_1474805 2L 1474273 1474805 CG31925 CG31925 230 2.410714286 1474383 2.886932345 1474383 4.07523511 1474383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2L_1478584_1479118 2L 1478584 1479118 CG31925 CG31925 4541 1.675420168 1478973 2.082483781 1478973 2.68338558 1478973 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 2L_1485874_1486434 2L 1485874 1486434 CG31928 CG31928 5880 2.017857143 1485984 3.641334569 1485984 5.415882968 1485984 1 0 1 0 0 0 1 1 1 1 0 0 2 2 2 2 0 0 1 0 0 0 0 0 2L_1517638_1518750 2L 1517638 1518750 CG7428 halo TSS overlap 7.673319328 1518307 16.68489342 1518307 23.31452456 1518307 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 2L_1597665_1598192 2L 1597665 1598192 CG31935 CG14351 CG31935 CG14351 transcript overlap 0.93697479 1597756 3.16218721 1598022 3.49738767 1598022 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_1709853_1710337 2L 1709853 1710337 CG17660 CG17660 transcript overlap 1.177521008 1710242 2.508804449 1709963 3.62800418 1709963 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_1884803_1885267 2L 1884803 1885267 CG7337 CG7337 TSS overlap 1.761554622 1885101 2.74884152 1885101 3.8892372 1885101 0 0 0 0 0 0 1 1 1 1 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_1886313_1886863 2L 1886313 1886863 CG7337 CG7337 transcript overlap 1.68487395 1886694 3.178869323 1886694 5.881922675 1886694 0 1 1 0 0 0 2 2 2 2 1 0 2 2 2 2 1 0 3 0 0 0 0 0 2L_2013847_2014220 2L 2013847 2014220 CR31669 CR31669 597 2.080882353 2013872 2.593141798 2014050 2.998955068 2014050 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 2L_2019100_2019464 2L 2019100 2019464 CG4238 CG4238 4579 1.058823529 2019210 1.392956441 2019379 2.262277952 2019210 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_2044948_2045228 2L 2044948 2045228 CG31672 CG31672 297 1.549369748 2045058 3.443929564 2045058 4.593521421 2045058 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2161396_2161688 2L 2161396 2161688 CG3166 aop transcript overlap 2.153361345 2161519 2.057460612 2161417 2.374085684 2161519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2162783_2165538 2L 2162783 2165538 CG3166 aop transcript overlap 3.858193277 2164809 7.511584801 2164809 10.85161964 2164809 1 0 1 0 0 0 3 3 3 2 0 0 5 5 5 5 0 0 1 0 0 0 0 0 2L_2171847_2173170 2L 2171847 2173170 CG3166 aop transcript overlap 1.761554622 2172238 7.355885079 2172742 10.32183908 2172742 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2L_2178240_2178982 2L 2178240 2178982 CG3166 aop TSS overlap 1.745798319 2178348 3.290083411 2178348 5.538140021 2178348 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2196649_2197467 2L 2196649 2197467 CG10874 CG10874 4277 8.650210084 2197307 3.489341983 2197030 5.177638454 2197030 1 0 1 0 0 0 3 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_2331397_2332233 2L 2331397 2332233 CG9967 CG9967 transcript overlap 1.485294118 2331802 3.282669138 2331802 5.169278997 2331802 0 1 1 0 0 0 4 2 2 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 2L_2388485_2389068 2L 2388485 2389068 CG3557 CG3557 2693 1.74789916 2388624 2.482854495 2388624 3.950888192 2388624 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 1 1 1 0 0 0 2L_2447933_2448476 2L 2447933 2448476 CG9885 dpp transcript overlap 1.239495798 2448043 3.929564411 2448043 5.098223615 2448043 0 1 1 0 0 1 "St. Johnston and Gelbart, 1987; Huang et al., 1993" 1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 2L_2453415_2453904 2L 2453415 2453904 CG9885 dpp transcript overlap 2.119747899 2453517 2.203892493 2453736 3.144200627 2453736 0 0 0 0 0 1 "St. Johnston and Gelbart, 1987; Huang et al., 1993" 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 2 1 0 2L_2454392_2454768 2L 2454392 2454768 CG9885 dpp transcript overlap 2.06197479 2454710 2.354958295 2454710 3.194357367 2454502 0 0 0 0 0 1 "St. Johnston and Gelbart, 1987; Huang et al., 1993" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2456248_2457530 2L 2456248 2457530 CG9885 dpp transcript overlap 3.12289916 2456609 5.59128823 2456834 8.878787879 2456834 1 0 1 1 0 1 "St. Johnston and Gelbart, 1987; Huang et al., 1993" 2 1 1 1 1 1 1 1 0 0 0 0 2 1 1 1 1 1 2L_2492870_2493004 2L 2492870 2493004 CG9884 oaf TSS overlap 2.538865546 2492907 2.333642261 2492907 3.401253918 2492907 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_2524413_2525235 2L 2524413 2525235 CG3528 CG3528 6376 1.289915966 2524522 3.005560704 2524802 3.458725183 2524802 0 0 0 0 0 0 4 3 3 2 2 1 2 2 2 1 1 1 0 0 0 0 0 0 2L_2539627_2539907 2L 2539627 2539907 CG3515 CG3515 12937 1.094537815 2539737 1.646895273 2539737 2.470219436 2539737 0 0 0 0 0 0 1 1 1 1 0 0 2 1 1 1 1 0 0 0 0 0 0 0 2L_2577414_2578200 2L 2577414 2578200 CG9883 CG9883 TSS overlap 1.596638655 2578031 3.009267841 2577751 3.138975967 2577751 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2580104_2580462 2L 2580104 2580462 CG9881 p16-ARC TSS overlap 2.456932773 2580214 2.385542169 2580371 1.263322884 2580371 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2749502_2751407 2L 2749502 2751407 CG3127 Pgk 980 15.68382353 2749612 7.549582947 2750677 10.08986416 2750677 1 0 1 0 0 0 5 1 1 1 1 1 4 2 2 1 1 1 0 0 0 0 0 0 2L_2753147_2753770 2L 2753147 2753770 CG9894 CG9894 transcript overlap 4.471638655 2753625 1.822057461 2753625 2.426332288 2753625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2755358_2755612 2L 2755358 2755612 CG9894 CG9894 transcript overlap 2.074579832 2755443 2.775718258 2755443 3.237199582 2755443 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 2 2 2 0 0 0 0 0 0 2L_2756110_2756408 2L 2756110 2756408 CG9894 CG9894 transcript overlap 4.096638655 2756184 1.356811863 2756184 2.248693835 2756184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_2814693_2815385 2L 2814693 2815385 CG15400 CG15400 transcript overlap 1.18697479 2814779 1.848007414 2815052 2.65308255 2814779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2873405_2873685 2L 2873405 2873685 CG31694 CG31694 transcript overlap 1.37605042 2873515 1.913809082 2873515 1.617554859 2873515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_2874608_2875049 2L 2874608 2875049 CG8814 CG8814 TSS overlap 1.94012605 2874797 2.539388323 2874797 4.113897597 2874797 0 0 0 0 0 0 1 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 2L_2885004_2885554 2L 2885004 2885554 CG3059 NTPase transcript overlap 1.798319328 2885253 2.094531974 2885253 3.262277952 2885114 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_2889040_2889542 2L 2889040 2889542 CG8817 lilli transcript overlap 1.06407563 2889149 3.042632067 2889373 2.995820272 2889149 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 2L_2987477_2988457 2L 2987477 2988457 CG3733 CG18642 Chd1 Bem46 TSS overlap 5.606092437 2987727 2.525486562 2988287 4.935214211 2988287 0 0 0 0 0 0 4 2 2 1 1 0 2 1 1 1 1 0 1 0 0 0 0 0 2L_2999386_3001267 2L 2999386 3001267 CG3558 CG3558 6422 2.37289916 3000324 5.245597776 3000847 7.885057471 3000847 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 5 0 0 0 0 0 2L_3071598_3072957 2L 3071598 3072957 CG9660 toc transcript overlap 3.017857143 3071988 3.742354032 3071988 5.251828631 3071988 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 6 3 0 0 0 0 2L_3078380_3079457 2L 3078380 3079457 CG9660 toc transcript overlap 2.328781513 3078972 4.367933272 3078972 5.538140021 3078972 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_3082667_3084235 2L 3082667 3084235 CG9660 toc transcript overlap 3.492647059 3083310 8.160333642 3083056 9.721003135 3083056 1 0 1 0 0 0 6 5 3 2 1 0 2 1 1 1 0 0 2 2 1 1 1 0 2L_3094396_3095556 2L 3094396 3095556 CG9660 toc transcript overlap 4.62289916 3095091 6.101019462 3095091 7.89446186 3095091 1 0 1 0 0 0 6 4 3 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 2L_3108186_3108460 2L 3108186 3108460 CG9660 toc transcript overlap 2.941176471 3108296 1.816496756 3108296 2.224660397 3108296 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_3158653_3159389 2L 3158653 3159389 CG12399 Mad transcript overlap 4.204831933 3158763 2.329008341 3158997 3.766980146 3158997 0 0 0 0 0 0 1 1 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_3172589_3172729 2L 3172589 3172729 CG3485 CG3485 TSS overlap 0.929621849 3172629 1.677479147 3172629 1.922675026 3172629 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_3372742_3372958 2L 3372742 3372958 CG15411 CG15411 89 1.105042017 3372860 1.822984245 3372860 2.398119122 3372860 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3442571_3442850 2L 3442571 3442850 CG2772 CG2772 3147 1.107142857 3442680 3.011121409 3442680 4.429467085 3442680 0 0 0 0 0 0 3 2 1 0 0 0 4 2 0 0 0 0 0 0 0 0 0 0 2L_3465449_3466079 2L 3465449 3466079 CG3241 msl-2 transcript overlap 2.039915966 3465559 1.900834106 3465559 2.277951933 3465839 0 0 0 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 2 2 1 1 0 0 2L_3532870_3533923 2L 3532870 3533923 CG8853 CG8853 1967 1.62605042 3533532 4.766450417 3533532 6.326018809 3533532 0 1 1 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 3 0 0 0 0 0 2L_3539087_3539199 2L 3539087 3539199 CG10016 drm 52 1.101890756 3539113 1.376274328 3539113 1.12539185 3539113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3539319_3539524 2L 3539319 3539524 CG10016 drm transcript overlap 1.504201681 3539354 1.626506024 3539354 1.089864159 3539354 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3549194_3549978 2L 3549194 3549978 CG10016 drm 9943 1.754201681 3549808 3.816496756 3549528 4.567398119 3549528 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 2L_3602601_3603124 2L 3602601 3603124 CG3851 odd 3624 1.24789916 3602991 4.12326228 3602991 6.108672936 3602991 0 1 1 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_3606233_3607070 2L 3606233 3607070 CG3851 odd TSS overlap 2.652310924 3606730 2.963855422 3606730 3.379310345 3606730 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_3608131_3609727 2L 3608131 3609727 CG3851 odd 1383 2.255252101 3609067 5.907321594 3609067 7.359456635 3609067 1 0 1 0 0 0 2 1 1 1 0 0 4 4 3 2 2 0 1 0 0 0 0 0 2L_3610003_3610273 2L 3610003 3610273 CG3851 odd 3255 0.431722689 3610112 2.537534754 3610112 0.779519331 3610112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3614101_3615695 2L 3614101 3615695 CG2788 Dot 3597 1.459033613 3614755 3.530120482 3614755 5.861024033 3614755 0 1 1 0 0 0 1 1 0 0 0 0 2 2 1 1 1 0 2 1 0 0 0 0 2L_3618991_3619319 2L 3618991 3619319 CG2788 Dot TSS overlap 1.136554622 3619219 1.807228916 3619219 2.267502612 3619079 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3631694_3633271 2L 3631694 3633271 CG10033 for transcript overlap 1.795168067 3632065 4.728452271 3632345 6.376175549 3632345 0 1 1 0 0 0 2 2 1 1 1 0 2 1 1 1 0 0 3 1 0 0 0 0 2L_3633940_3634137 2L 3633940 3634137 CG10033 for transcript overlap 1.480042017 3633968 1.720111214 3633968 2.197492163 3633968 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_3667418_3667695 2L 3667418 3667695 CG10033 for 10467 1.704831933 3667528 2.980537535 3667528 3.415882968 3667528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_3681470_3682119 2L 3681470 3682119 CG2808 CG2808 transcript overlap 1.335084034 3681711 2.516218721 3681711 3.490073145 3681711 0 0 0 0 0 0 0 0 0 0 0 0 3 3 2 2 1 1 1 1 1 0 0 0 2L_3769965_3772111 2L 3769965 3772111 CG10021 bowl TSS overlap 2.649159664 3771765 5.075069509 3771765 9.297805643 3771765 1 0 1 0 0 0 2 2 2 2 2 2 1 0 0 0 0 0 7 2 0 0 0 0 2L_3775560_3776115 2L 3775560 3776115 CG10021 bowl transcript overlap 1.469537815 3775950 2.090824838 3775950 2.986415883 3775670 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_3803775_3803982 2L 3803775 3803982 CG3920 l(2)k16918 transcript overlap 2.385504202 3803815 1.848007414 3803815 2.223615465 3803815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_3817765_3818822 2L 3817765 3818822 CG3407 CG3407 4358 1.44012605 3818155 4.370713624 3818431 5.496342738 3818431 0 1 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3821283_3823191 2L 3821283 3823191 CG16738 slp1 2489 1.169117647 3822750 4.080630213 3821367 5.549634274 3822750 0 1 1 0 0 0 1 0 0 0 0 0 4 2 0 0 0 0 1 0 0 0 0 0 2L_3823991_3824504 2L 3823991 3824504 CG16738 slp1 1176 1.039915966 3824101 2.606116775 3824101 2.240334378 3824101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_3828069_3828334 2L 3828069 3828334 CG16738 slp1 2389 1.071428571 3828165 2.165894347 3828165 3.103448276 3828165 0 0 0 0 0 0 2 2 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 2L_3833582_3834671 2L 3833582 3834671 CG2939 slp2 2171 1.399159664 3834252 3.102873031 3833972 5.655172414 3833972 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_3860518_3861510 2L 3860518 3861510 CG3964 CG3964 1171 1.578781513 3860898 2.60055607 3861126 4.337513062 3861126 0 0 0 0 0 0 3 2 1 0 0 0 3 2 2 0 0 0 3 0 0 0 0 0 2L_3862845_3863671 2L 3862845 3863671 CG3964 CG3964 transcript overlap 1.639705882 3863215 2.850787766 3863215 3.47753396 3863215 0 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_4023606_4024117 2L 4023606 4024117 CG12676 ed 7262 1.779411765 4023716 2.387395737 4023716 3.401253918 4023716 0 0 0 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4031335_4032204 2L 4031335 4032204 CG12676 ed TSS overlap 2.301470588 4031387 5.329935125 4031758 8.873563218 4031758 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4034385_4035154 2L 4034385 4035154 CG12676 ed transcript overlap 3.68697479 4034494 4.1918443 4034494 8.661442006 4034494 1 0 1 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 2L_4050556_4051115 2L 4050556 4051115 CG12676 ed transcript overlap 1.580882353 4050666 3.352177943 4050945 4.710553814 4050945 0 0 0 0 0 0 3 3 2 2 2 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_4053536_4054095 2L 4053536 4054095 CG12676 ed transcript overlap 2.114495798 4053925 1.974050046 4053925 2.454545455 4053925 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2L_4055627_4055879 2L 4055627 4055879 CG12676 ed transcript overlap 1.480042017 4055709 1.802594995 4055709 2.094043887 4055709 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_4132220_4132755 2L 4132220 4132755 CG4099 Sr-CI 10499 1.199579832 4132608 2.400370714 4132330 2.586206897 4132330 0 0 0 0 0 0 0 0 0 0 0 0 3 2 2 1 0 0 0 0 0 0 0 0 2L_4169961_4170240 2L 4169961 4170240 CG11767 Or24a 3860 1.529411765 4170071 1.816496756 4170071 2.23092999 4170071 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_4221264_4222279 2L 4221264 4222279 CG3352 ft 3412 1.340336134 4221908 4.875810936 4221908 6.760710554 4221908 0 1 1 0 0 0 1 1 1 0 0 0 4 1 1 0 0 0 0 0 0 0 0 0 2L_4280814_4283291 2L 4280814 4283291 CG15427 tutl TSS overlap 1.642857143 4281964 5.835959222 4282796 9.065830721 4282796 0 1 1 0 0 0 1 0 0 0 0 0 3 1 0 0 0 0 3 0 0 0 0 0 2L_4283464_4283721 2L 4283464 4283721 CG15427 tutl transcript overlap 0.996848739 4283551 1.263206673 4283551 1.037617555 4283551 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 2L_4286981_4287805 2L 4286981 4287805 CG15427 tutl transcript overlap 2.487394958 4287356 7.304911956 4287356 9.835945664 4287356 1 0 1 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_4351192_4352028 2L 4351192 4352028 CG15429 CG15429 947 1.489495798 4351302 3.618164968 4351302 3.782654127 4351302 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_4363645_4364428 2L 4363645 4364428 CG3048 Traf1 7562 1.512605042 4364033 4.254865616 4364033 5.494252874 4364033 0 1 1 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_4366567_4367123 2L 4366567 4367123 CG3048 Traf1 4867 2.774159664 4366677 7.96107507 4366677 10.68025078 4366677 1 0 1 0 0 0 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4367676_4369303 2L 4367676 4369303 CG3048 Traf1 2687 1.635504202 4368864 3.16218721 4368864 4.5276907 4368864 0 0 0 0 0 0 3 2 2 2 2 0 3 2 1 1 1 0 2 1 0 0 0 0 2L_4369794_4371149 2L 4369794 4371149 CG3048 Traf1 841 2.355042017 4370175 6.088044486 4370175 3.709508882 4370175 1 0 1 0 0 0 1 1 1 0 0 0 5 5 3 0 0 0 0 0 0 0 0 0 2L_4371850_4372201 2L 4371850 4372201 CG3048 Traf1 TSS overlap 2.614495798 4372031 1.624652456 4371889 2.632183908 4372031 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_4375155_4375398 2L 4375155 4375398 CG3048 Traf1 transcript overlap 2.613445378 4375228 1.892493049 4375228 2.621734587 4375228 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_4378054_4379933 2L 4378054 4379933 CG3048 Traf1 transcript overlap 4.31512605 4379763 5.256719184 4378719 7.771159875 4378719 1 0 1 0 0 0 2 2 2 1 1 0 3 3 2 2 2 0 1 0 0 0 0 0 2L_4386904_4387245 2L 4386904 4387245 CG18013 CG18013 TSS overlap 1.692226891 4387078 2.153846154 4386942 2.202716823 4386942 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_4444449_4445227 2L 4444449 4445227 CG15437 CG15433 morgue CG15433 TSS overlap 1.602941176 4444559 2.391102873 4444669 3.467084639 4444779 0 0 0 0 0 0 4 2 2 1 0 0 3 2 1 1 1 0 0 0 0 0 0 0 2L_4489778_4490258 2L 4489778 4490258 CG33196 dp transcript overlap 1.463235294 4490114 1.976830399 4489878 2.728317659 4489878 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_4494605_4495392 2L 4494605 4495392 CG33196 dp transcript overlap 1.381302521 4495222 4.647822057 4495222 5.536050157 4495222 0 1 1 0 0 0 2 1 1 1 0 0 3 3 2 0 0 0 0 0 0 0 0 0 2L_4498356_4498603 2L 4498356 4498603 CG33196 dp transcript overlap 1.351890756 4498463 2.089898054 4498463 2.623824451 4498463 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 2L_4505281_4506170 2L 4505281 4506170 CG33196 dp transcript overlap 0.951680672 4506000 1.759036145 4505720 2.747126437 4506000 0 0 0 0 0 0 3 2 0 0 0 0 4 3 3 1 0 0 1 0 0 0 0 0 2L_4519185_4519935 2L 4519185 4519935 CG33196 dp transcript overlap 1.260504202 4519549 4.69416126 4519549 6.871473354 4519549 0 1 1 0 0 0 3 1 1 0 0 0 2 1 1 0 0 0 1 1 1 0 0 0 2L_4534635_4537351 2L 4534635 4537351 CG33196 dp transcript overlap 1.084033613 4535524 1.84244671 4535524 2.360501567 4535017 0 0 0 0 0 0 8 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 2L_4537981_4540750 2L 4537981 4540750 CG33196 dp transcript overlap 1.045168067 4539504 1.823911029 4538070 2.350052247 4539784 0 0 0 0 0 0 10 0 0 0 0 0 18 2 0 0 0 0 0 0 0 0 0 0 2L_4541308_4542685 2L 4541308 4542685 CG33196 dp transcript overlap 1.094537815 4541418 1.799814643 4541418 2.347962382 4541418 0 0 0 0 0 0 5 0 0 0 0 0 10 1 0 0 0 0 0 0 0 0 0 0 2L_4544053_4544834 2L 4544053 4544834 CG33196 dp transcript overlap 1.012605042 4544163 1.717330862 4544443 2.250783699 4544664 0 0 0 0 0 0 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 2L_4545114_4545954 2L 4545114 4545954 CG33196 dp transcript overlap 0.996848739 4545784 1.740500463 4545784 2.222570533 4545784 0 0 0 0 0 0 3 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 2L_4553871_4554389 2L 4553871 4554389 CG33196 dp transcript overlap 1.203781513 4553979 2.760889713 4554219 3.386624869 4553979 0 0 0 0 0 0 2 2 2 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 2L_4557887_4558985 2L 4557887 4558985 CG33196 dp transcript overlap 1.278361345 4558815 4.897126969 4558255 6.249738767 4558255 0 1 1 0 0 0 4 1 0 0 0 0 3 2 1 1 0 0 1 1 1 1 0 0 2L_4597707_4597980 2L 4597707 4597980 CG33196 dp 5744 1.010504202 4597810 2.505097312 4597810 3.603970742 4597810 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4742205_4742454 2L 4742205 4742454 CG15630 CG15630 transcript overlap 0.944327731 4742284 2.303985171 4742284 2.063740857 4742284 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4810277_4810556 2L 4810277 4810556 CG15629 CG15629 2469 1.550420168 4810387 2.584800741 4810387 3.173458725 4810387 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_4823627_4824413 2L 4823627 4824413 CG15628 CG15628 transcript overlap 3.911764706 4824000 8.431881372 4824000 11.77324974 4824000 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 3 1 0 0 0 0 2L_4865413_4865620 2L 4865413 4865620 CG31660 CG31660 transcript overlap 1.181722689 4865509 4.139017609 4865509 4.933124347 4865509 0 0 0 0 0 0 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_4889447_4889936 2L 4889447 4889936 CG15625 CG15625 59 1.601890756 4889557 3.061167748 4889557 3.251828631 4889557 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_4892167_4892505 2L 4892167 4892505 CG3036 CG3036 transcript overlap 2.822478992 4892335 1.670064875 4892203 2.333333333 4892203 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_4893602_4893862 2L 4893602 4893862 CG3036 CG3036 transcript overlap 1.631302521 4893698 1.249304912 4893698 1.374085684 4893698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4894111_4894360 2L 4894111 4894360 CG3036 CG3036 transcript overlap 2.210084034 4894197 1.21686747 4894197 1.672936259 4894197 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_4896986_4897266 2L 4896986 4897266 CG3036 CG3036 transcript overlap 2.921218487 4897096 1.925857275 4897096 3.340647858 4897096 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_4901201_4902860 2L 4901201 4902860 CG3036 CG3036 transcript overlap 3.474789916 4902690 1.647822057 4902410 2.923719958 4902410 0 0 0 0 0 0 2 2 1 1 1 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_4904177_4904719 2L 4904177 4904719 CG2837 CG2837 transcript overlap 11.78361345 4904564 1.403151066 4904564 2.902821317 4904564 0 0 0 0 0 0 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_4955438_4955917 2L 4955438 4955917 CG3753 Marcal1 TSS overlap 1.87394958 4955469 2.339202966 4955609 3.632183908 4955609 0 0 0 0 0 0 3 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_4981601_4982190 2L 4981601 4982190 CG8892 CG8892 13 1.647058824 4981627 1.909175162 4982020 2.78369906 4982020 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_5000138_5001003 2L 5000138 5001003 CG33113 Rtnl1 transcript overlap 2.44012605 5000561 2.923076923 5000833 3.73354232 5000833 0 0 0 0 0 0 0 0 0 0 0 0 3 2 1 0 0 0 2 0 0 0 0 0 2L_5113815_5114081 2L 5113815 5114081 CG33715 Msp-300 3496 0.867647059 5113913 1.589434662 5113913 2.165099269 5113913 0 0 0 0 0 0 2 1 0 0 0 0 2 2 2 1 0 0 0 0 0 0 0 0 2L_5202505_5202984 2L 5202505 5202984 CG33715 Msp-300 transcript overlap 1.169117647 5202814 2.737720111 5202814 3.464994775 5202814 0 0 0 0 0 0 1 1 1 1 1 1 2 1 1 1 0 0 1 0 0 0 0 0 2L_5225745_5226023 2L 5225745 5226023 CG14026 tkv transcript overlap 1.984243697 5225853 1.784059314 5225853 2.374085684 5225853 0 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2L_5238302_5238891 2L 5238302 5238891 CG14026 tkv transcript overlap 1.039915966 5238721 2.2557924 5238721 2.787878788 5238721 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5239532_5240570 2L 5239532 5240570 CG14026 tkv transcript overlap 1.852941176 5239922 5.717330862 5239922 4.648902821 5239922 0 1 1 0 0 0 1 1 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 2L_5242674_5243140 2L 5242674 5243140 CG14026 tkv transcript overlap 2.283613445 5242724 1.733086191 5242724 3.176593521 5242724 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_5277070_5277622 2L 5277070 5277622 CG14025 Bsg25D transcript overlap 1.330882353 5277180 1.741427247 5277452 2.811912226 5277452 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5325399_5325656 2L 5325399 5325656 CG14023 CG14023 472 1.635504202 5325486 1.934198332 5325486 2.389759666 5325486 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5355278_5356044 2L 5355278 5356044 CG11020 nompC transcript overlap 0.959033613 5355876 2.815569972 5355596 3.932079415 5355596 0 0 0 0 0 0 2 0 0 0 0 0 2 2 2 0 0 0 0 0 0 0 0 0 2L_5366758_5367343 2L 5366758 5367343 CG11020 nompC 20521 1.141806723 5366877 3.137164041 5367092 2.60292581 5367092 0 0 0 0 0 0 2 2 2 2 2 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_5381115_5382196 2L 5381115 5382196 CG6604 H15 22146 2.454831933 5381486 3.436515292 5381486 4.787878788 5381486 0 0 0 0 0 0 2 2 2 2 2 0 3 3 2 2 2 0 1 0 0 0 0 0 2L_5400514_5401340 2L 5400514 5401340 CG6604 H15 3002 2.053571429 5401172 2.545875811 5400895 2.910135841 5400615 0 0 0 0 0 0 2 2 2 2 1 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_5403619_5403896 2L 5403619 5403896 CG6604 H15 446 3.308823529 5403726 2.545875811 5403726 1.79414838 5403726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5410156_5410951 2L 5410156 5410951 CG6604 H15 transcript overlap 1.818277311 5410528 5.100092678 5410528 7.220480669 5410528 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_5422952_5423488 2L 5422952 5423488 CG6604 H15 18610 1.832983193 5423058 1.506024096 5423058 2.587251829 5423058 0 0 0 0 0 0 3 3 3 3 3 2 3 3 3 3 2 0 1 1 0 0 0 0 2L_5455385_5455655 2L 5455385 5455655 CG6634 mid 5986 0.973739496 5455486 1.346617238 5455486 1.991640543 5455486 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_5456774_5457051 2L 5456774 5457051 CG6634 mid 4590 0.842436975 5456884 1.691380908 5456884 2.271682341 5456884 0 0 0 0 0 0 2 1 1 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_5461171_5461365 2L 5461171 5461365 CG6634 mid 276 7.06407563 5461198 2.002780352 5461198 2.267502612 5461198 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5473838_5474671 2L 5473838 5474671 CG6634 mid 12197 1.360294118 5474228 3.291010195 5474228 5.16091954 5474228 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5517370_5517997 2L 5517370 5517997 CG14020 CG14020 TSS overlap 1.43907563 5517757 2.844300278 5517757 4.085684431 5517757 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_5550698_5551261 2L 5550698 5551261 CG14014 CG14014 TSS overlap 1.741596639 5550804 3.048192771 5550804 4.596656217 5550804 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_5564131_5564379 2L 5564131 5564379 CR32998 snRNA:U4:25F 1240 1.549369748 5564219 3.633920297 5564219 5.106583072 5564219 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_5658435_5658760 2L 5658435 5658760 CG31646 CG31646 TSS overlap 2.554621849 5658606 3.488415199 5658606 5.770114943 5658606 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5730679_5731229 2L 5730679 5731229 CG11030 CG11030 transcript overlap 1.347689076 5731059 2.980537535 5730789 3.297805643 5730789 0 0 0 0 0 0 3 1 1 1 1 0 3 2 1 1 1 0 0 0 0 0 0 0 2L_5780700_5781280 2L 5780700 5781280 CG9171 CG9171 transcript overlap 1.75105042 5780810 3.656163114 5780810 1.967607106 5780810 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_5789144_5789950 2L 5789144 5789950 CG9171 CG9171 transcript overlap 2.93802521 5789506 4.693234476 5789506 6.684430512 5789506 1 0 1 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 2L_5799721_5800140 2L 5799721 5800140 CG9171 CG9171 transcript overlap 1.853991597 5800040 2.147358665 5800040 2.102403344 5799835 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_5801581_5801904 2L 5801581 5801904 CG14005 CG14005 transcript overlap 1.621848739 5801664 2.494902688 5801664 3.067920585 5801804 0 0 0 0 0 0 3 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5805186_5805495 2L 5805186 5805495 CG11034 CG11034 TSS overlap 1.891806723 5805268 5.122335496 5805268 7.593521421 5805268 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_5852633_5853160 2L 5852633 5853160 CG31645 CG31645 transcript overlap 1.204831933 5852723 3.110287303 5853000 4.796238245 5853000 0 0 0 0 0 0 3 2 1 1 1 0 3 1 1 1 1 1 0 0 0 0 0 0 2L_5870267_5871594 2L 5870267 5871594 CG8965 CG8965 transcript overlap 3.621848739 5871202 16.23169601 5871202 19.77429467 5871202 1 0 1 0 0 0 1 1 1 1 0 0 2 2 2 2 2 1 2 1 0 0 0 0 2L_5877499_5878057 2L 5877499 5878057 CG8965 CG8965 transcript overlap 1.412815126 5877887 2.208526413 5877609 4.314524556 5877887 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5879138_5879696 2L 5879138 5879696 CG8965 CG8965 TSS overlap 1.62710084 5879526 2.089898054 5879387 3.555903866 5879248 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_5890657_5890913 2L 5890657 5890913 CG9024 Acp26Ab 1949 1.733193277 5890766 1.529193698 5890766 2.102403344 5890766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5902860_5903111 2L 5902860 5903111 CG9021 CG9021 1563 1.382352941 5902965 2.367006487 5902965 1.71368861 5902965 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_5907362_5907901 2L 5907362 5907901 CG14001 bchs transcript overlap 2.075630252 5907731 4.746061168 5907470 6.586206897 5907470 1 0 1 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 2L_5968941_5969454 2L 5968941 5969454 CG9064 Ucp4C transcript overlap 1.824579832 5969051 2.500463392 5969051 3.616509927 5969284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2L_5978289_5978569 2L 5978289 5978569 CG9553 chic transcript overlap 1.819327731 5978399 2.136237257 5978399 1.681295716 5978399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5980558_5980763 2L 5980558 5980763 CG9553 chic transcript overlap 1.960084034 5980598 2.297497683 5980598 1.804597701 5980598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_5981597_5981902 2L 5981597 5981902 CG9075 eIF-4a TSS overlap 1.75210084 5981707 2.169601483 5981817 1.15569488 5981817 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 2L_5983467_5983725 2L 5983467 5983725 CG9075 eIF-4a transcript overlap 0.74789916 5983577 1.96570899 5983577 2.26123302 5983577 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_5996899_5997634 2L 5996899 5997634 CG9088 lid transcript overlap 1.608193277 5997190 2.557924004 5997190 5.263322884 5997190 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2L_6019641_6019903 2L 6019641 6019903 CG11607 H2.0 243 1.56512605 6019733 2.678405931 6019733 1.448275862 6019733 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_6037794_6038121 2L 6037794 6038121 CG9117 CG9117 TSS overlap 1.209033613 6037816 1.959221501 6037920 2.213166144 6037920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6071366_6072155 2L 6071366 6072155 CG9159 Kr-h2 transcript overlap 1.43907563 6071476 7.843373494 6071705 12.65621735 6071705 0 1 1 0 0 0 3 2 2 2 2 2 3 2 2 2 2 2 1 0 0 0 0 0 2L_6078751_6079799 2L 6078751 6079799 CG9162 CG9162 298 2.675420168 6078878 6.40871177 6078878 9.426332288 6078878 1 0 1 0 0 0 3 2 0 0 0 0 5 1 1 0 0 0 2 1 0 0 0 0 2L_6088389_6088876 2L 6088389 6088876 CG18783 Kr-h1 transcript overlap 4.551470588 6088499 4.504170528 6088499 5.827586207 6088499 1 0 1 0 0 0 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 2L_6093972_6094170 2L 6093972 6094170 CG18783 Kr-h1 transcript overlap 0.989495798 6094083 2.792400371 6094083 3.298850575 6094083 0 0 0 0 0 0 2 2 2 1 0 0 2 2 2 2 2 1 0 0 0 0 0 0 2L_6152155_6152485 2L 6152155 6152485 CG13990 CG13990 transcript overlap 1.121848739 6152265 1.158480074 6152265 2.207941484 6152265 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6152814_6153332 2L 6152814 6153332 CG13990 CG13990 transcript overlap 0.671218487 6153034 5.77849861 6153034 9.503657262 6153034 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6204669_6205213 2L 6204669 6205213 CG31640 CG31640 transcript overlap 2.167016807 6204779 2.88137164 6204779 2.44200627 6204779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6228954_6230011 2L 6228954 6230011 CG9481 Ugt37b1 3904 1.444327731 6229591 2.810009268 6229591 3.460815047 6229344 0 0 0 0 0 0 3 0 0 0 0 0 4 1 0 0 0 0 1 0 0 0 0 0 2L_6241945_6242523 2L 6241945 6242523 CG9486 CG9486 13353 1.629201681 6242362 3.092678406 6242362 3.001044932 6242362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6259692_6259968 2L 6259692 6259968 CG9486 CG9486 3816 0.907563025 6259795 1.614457831 6259795 2.473354232 6259795 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_6338708_6339604 2L 6338708 6339604 CG11567 Cpr TSS overlap 1.410714286 6339159 2.308619092 6339439 4.10553814 6339159 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6373022_6374641 2L 6373022 6374641 CG9506 slam transcript overlap 2.330882353 6374471 2.628359592 6374471 5.21630094 6374471 1 0 1 0 0 0 5 2 1 0 0 0 1 1 0 0 0 0 3 0 0 0 0 0 2L_6375171_6375728 2L 6375171 6375728 CG9506 slam transcript overlap 3.030462185 6375561 1.727525487 6375561 3.262277952 6375561 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6376546_6376800 2L 6376546 6376800 CG9506 slam transcript overlap 2.329831933 6376656 1.066728452 6376656 2.542319749 6376656 0 0 0 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6390447_6390737 2L 6390447 6390737 CG9508 CG9508 transcript overlap 2.358193277 6390568 2.326227989 6390568 2.693834901 6390568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6411217_6411497 2L 6411217 6411497 CG13982 CG13982 1207 2 6411327 1.814643188 6411327 2.810867294 6411327 0 0 0 0 0 0 0 0 0 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 2L_6417282_6417559 2L 6417282 6417559 CG11527 Tig transcript overlap 1.298319328 6417391 1.935125116 6417391 3.349007315 6417391 0 0 0 0 0 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 2L_6459663_6460209 2L 6459663 6460209 CG16947 CG16947 transcript overlap 1.359243697 6460040 2.240037071 6459770 3.345872518 6459770 0 0 0 0 0 0 3 3 2 2 2 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_6479529_6479803 2L 6479529 6479803 CG9539 Sec61alpha transcript overlap 1.267857143 6479633 1.976830399 6479633 3.02507837 6479633 0 0 0 0 0 0 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_6531034_6531587 2L 6531034 6531587 CG9554 eya transcript overlap 1.461134454 6531142 3.265987025 6531142 2.801462905 6531142 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_6532143_6532629 2L 6532143 6532629 CG9554 eya transcript overlap 1.113445378 6532253 3.147358665 6532253 2.349007315 6532253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6561508_6562004 2L 6561508 6562004 CG9596 CG9596 TSS overlap 1.118697479 6561630 2.297497683 6561846 3.456635319 6561846 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6646108_6646877 2L 6646108 6646877 CG31635 CG31635 transcript overlap 1.387605042 6646479 4.662650602 6646479 7.868338558 6646479 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_6647429_6647698 2L 6647429 6647698 CG31635 CG31635 transcript overlap 1.278361345 6647532 2.197405005 6647532 2.184952978 6647532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2L_6675607_6676157 2L 6675607 6676157 CG11330 cort transcript overlap 1.990546218 6675987 2.643188137 6675987 2.273772205 6675987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6683291_6683801 2L 6683291 6683801 CG11328 Nhe3 transcript overlap 1.232142857 6683646 1.796107507 6683646 2.728317659 6683646 0 0 0 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 2L_6684369_6684989 2L 6684369 6684989 CG11328 Nhe3 12 4.072478992 6684595 3.724745134 6684595 4.876698015 6684595 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_6716160_6716510 2L 6716160 6716510 CG11325 GRHR TSS overlap 2.106092437 6716200 1.693234476 6716200 3.414838036 6716200 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_6722672_6723327 2L 6722672 6723327 CG11324 homer transcript overlap 2.272058824 6722782 4.690454124 6722782 7.742946708 6722782 1 0 1 0 0 0 4 0 0 0 0 0 2 0 0 0 0 0 1 1 1 0 0 0 2L_6734389_6735221 2L 6734389 6735221 CG11201 CG11201 transcript overlap 1.256302521 6734779 7.860055607 6734779 14.18913271 6734779 0 1 1 0 0 0 3 3 2 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_6737551_6738307 2L 6737551 6738307 CG11323 CG11323 transcript overlap 1.146008403 6737661 3.253012048 6737661 4.084639498 6737661 0 0 0 0 0 0 4 3 3 2 2 0 3 3 3 3 2 0 0 0 0 0 0 0 2L_6788279_6788529 2L 6788279 6788529 CG9258 nrv1 1430 0.950630252 6788359 4.738646895 6788359 6.654127482 6788359 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_6801928_6802651 2L 6801928 6802651 CG17377 CG17377 transcript overlap 1.276260504 6802039 2.210379981 6802271 3.082549634 6802039 0 0 0 0 0 0 3 1 1 0 0 0 5 1 1 1 0 0 0 0 0 0 0 0 2L_6829868_6830753 2L 6829868 6830753 CG31632 CG31632 transcript overlap 1.514705882 6830587 2.784059314 6830258 2.432601881 6830258 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_6843303_6843552 2L 6843303 6843552 CG10800 Rca1 8772 1.013655462 6843409 2.154772938 6843409 3.058516196 6843409 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 2L_6921471_6922588 2L 6921471 6922588 CG10377 Hrb27C transcript overlap 2.154411765 6921917 3.545875811 6921917 3.114942529 6921917 0 0 0 0 0 0 1 1 0 0 0 0 5 5 3 1 0 0 0 0 0 0 0 0 2L_6939561_6939982 2L 6939561 6939982 CG18304 CG18304 transcript overlap 5.171218487 6939893 2.327154773 6939893 4.531870428 6939893 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7009420_7011364 2L 7009420 7011364 CG13776 CG13776 2132 3.369747899 7010639 6.912882298 7010639 7.247648903 7010639 1 0 1 0 0 0 2 1 1 0 0 0 3 2 0 0 0 0 1 1 0 0 0 0 2L_7042947_7043721 2L 7042947 7043721 CG13777 CG31630 milt CG31630 transcript overlap 2.06092437 7043057 2.329935125 7043337 3.284221526 7043337 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 2L_7056034_7057966 2L 7056034 7057966 CG13778 Mnn1 TSS overlap 4.966386555 7056265 3.020389249 7056381 5.335423197 7056661 1 0 1 0 0 0 8 3 1 1 0 0 4 1 1 1 0 0 0 0 0 0 0 0 2L_7094765_7095248 2L 7094765 7095248 CG13780 Pvf2 10131 1.118697479 7095081 1.708989805 7095081 3.523510972 7095081 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_7100201_7100471 2L 7100201 7100471 CG31629 Pvf3 transcript overlap 1.236344538 7100301 1.564411492 7100301 2.166144201 7100301 0 0 0 0 0 0 3 3 2 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 2L_7103080_7103886 2L 7103080 7103886 CG31629 Pvf3 transcript overlap 1.06302521 7103190 3.775718258 7103190 4.711598746 7103470 0 0 0 0 0 0 2 2 2 1 0 0 3 2 2 0 0 0 0 0 0 0 0 0 2L_7143715_7143993 2L 7143715 7143993 CG31629 Pvf3 10032 1.160714286 7143823 2.758109361 7143823 2.692789969 7143823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7148249_7148807 2L 7148249 7148807 CG13783 CG13783 7890 2.128151261 7148357 2.615384615 7148357 3.167189133 7148357 0 0 0 0 0 0 1 0 0 0 0 0 3 2 2 1 0 0 0 0 0 0 0 0 2L_7212295_7212826 2L 7212295 7212826 CG13784 CG13784 transcript overlap 1.975840336 7212593 2.373493976 7212593 3.237199582 7212593 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_7245236_7245998 2L 7245236 7245998 CG4675 Ndae1 4736 1.87289916 7245346 1.724745134 7245560 2.226750261 7245346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_7247356_7248151 2L 7247356 7248151 CG13786 CG13786 4621 1.731092437 7247711 3.037071362 7247711 4.501567398 7247711 0 0 0 0 0 0 2 0 0 0 0 0 3 1 0 0 0 0 1 0 0 0 0 0 2L_7258134_7258417 2L 7258134 7258417 CG4698 Wnt4 transcript overlap 1.348739496 7258200 2.314179796 7258288 3.132706374 7258200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7277364_7277543 2L 7277364 7277543 CG4698 Wnt4 196 1.978991597 7277375 1.702502317 7277375 2.283176594 7277375 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_7289871_7290653 2L 7289871 7290653 CG13785 CG13785 7338 4.551470588 7290217 3.860055607 7289977 5.871473354 7289977 1 0 1 0 0 0 3 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_7295260_7296932 2L 7295260 7296932 CG4889 wg 10229 1.355042017 7296512 2.883225209 7295650 3.712643678 7295650 0 0 0 0 0 0 2 1 1 1 1 0 3 2 2 2 2 0 1 0 0 0 0 0 2L_7299287_7300660 2L 7299287 7300660 CG4889 wg 6501 2.457983193 7300211 4.888785913 7300211 7.247648903 7300211 1 0 1 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 2 1 1 0 0 0 2L_7304125_7305519 2L 7304125 7305519 CG4889 wg 1642 2.410714286 7305073 3.442075996 7304515 4.846394984 7304515 0 0 0 0 0 0 4 4 4 3 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_7306817_7307116 2L 7306817 7307116 CG4889 wg 45 4.158613445 7306922 2.242817424 7306922 2.867293626 7306922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7309885_7311229 2L 7309885 7311229 CG4889 wg transcript overlap 2.260504202 7310248 2.366079703 7309976 4.425287356 7310785 0 0 0 0 0 0 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7311769_7312592 2L 7311769 7312592 CG4889 wg transcript overlap 2.558823529 7312146 3.041705283 7312146 4.098223615 7312146 0 0 0 0 0 0 1 1 1 1 1 0 2 1 1 1 1 1 2 0 0 0 0 0 2L_7414298_7414538 2L 7414298 7414538 CG5229 chm transcript overlap 1.013655462 7414386 1.676552363 7414386 2.981191223 7414386 0 0 0 0 0 0 2 2 2 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_7491019_7491544 2L 7491019 7491544 CG6641 Pbprp5 5816 0.964285714 7491381 1.857275255 7491381 2.707419018 7491381 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_7512367_7512928 2L 7512367 7512928 CG33529 Rapgap1 transcript overlap 1.257352941 7512757 3.086190918 7512477 4.561128527 7512477 0 0 0 0 0 0 1 1 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_7515340_7515599 2L 7515340 7515599 CG33529 Rapgap1 transcript overlap 1.347689076 7515429 1.803521779 7515429 2.675026123 7515429 0 0 0 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_7516437_7516717 2L 7516437 7516717 CG33529 Rapgap1 transcript overlap 1.06512605 7516547 1.892493049 7516547 3.172413793 7516547 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_7519634_7520174 2L 7519634 7520174 CG33529 Rapgap1 transcript overlap 2.117647059 7520008 1.945319741 7519744 2.206896552 7520008 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_7526157_7527515 2L 7526157 7527515 CG33529 Rapgap1 transcript overlap 1.759453782 7527083 3.882298424 7527083 5.20585162 7527083 0 1 1 0 0 0 2 2 0 0 0 0 4 2 1 0 0 0 2 0 0 0 0 0 2L_7543879_7544490 2L 7543879 7544490 CG33529 Rapgap1 TSS overlap 1.680672269 7544256 2.824837813 7544256 3.878787879 7544256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_7632575_7633120 2L 7632575 7633120 CG13792 CG13792 12877 1.514705882 7632685 1.913809082 7632965 2.409613375 7632965 0 0 0 0 0 0 2 0 0 0 0 0 2 1 1 0 0 0 1 1 0 0 0 0 2L_7639910_7640448 2L 7639910 7640448 CG13792 CG13792 5549 2.18802521 7640278 2.155699722 7640278 2.594566353 7640278 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 2L_7687455_7687735 2L 7687455 7687735 CG6976 Myo28B1 transcript overlap 1.069327731 7687565 1.490268767 7687565 2.338557994 7687565 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_7772010_7772272 2L 7772010 7772272 CG7191 CG7191 transcript overlap 1.846638655 7772120 2.84244671 7772120 2.267502612 7772120 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_7799784_7800200 2L 7799784 7800200 CG7138 CG14536 r2d2 CG14536 TSS overlap 6.973739496 7799955 2.342910102 7799955 3.253918495 7799955 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_7827979_7828806 2L 7827979 7828806 CG7109 mts transcript overlap 1.943277311 7828089 2.372567192 7828089 2.501567398 7828356 0 0 0 0 0 0 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 2L_7887405_7887532 2L 7887405 7887532 CG7102 CG7102 TSS overlap 1.087184874 7887439 1.547729379 7887439 2.237199582 7887439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_7932979_7933213 2L 7932979 7933213 CG14532 CG14532 32944 2.06302521 7933070 3.416126043 7933070 3.917450366 7933070 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2L_7990050_7990555 2L 7990050 7990555 CG7228 CG7228 transcript overlap 1.109243697 7990408 1.731232623 7990136 2.50261233 7990136 0 0 0 0 0 0 2 1 1 0 0 0 3 3 0 0 0 0 0 0 0 0 0 0 2L_8030675_8031172 2L 8030675 8031172 CG7392 Cka TSS overlap 2.600840336 8030874 2.346617238 8030874 2.691745037 8030874 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8081533_8082216 2L 8081533 8082216 CG7586 Mcr transcript overlap 1.278361345 8082047 3.524559778 8081767 3.208986416 8081767 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8088040_8088368 2L 8088040 8088368 CG31605 Bsg transcript overlap 2.601890756 8088150 2.409638554 8088150 2.955067921 8088150 0 0 0 0 0 0 1 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2L_8092016_8092279 2L 8092016 8092279 CG31605 Bsg transcript overlap 1.890756303 8092126 2.926784059 8092126 2.469174504 8092126 0 0 0 0 0 0 1 1 1 1 1 1 3 2 2 1 1 1 0 0 0 0 0 0 2L_8145240_8145788 2L 8145240 8145788 CG8552 CG8552 transcript overlap 1.807773109 8145350 3.990732159 8145350 5.988505747 8145350 0 1 1 0 0 0 3 1 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 2L_8156687_8157237 2L 8156687 8157237 CG8552 CG8552 transcript overlap 2.357142857 8156792 3.732159407 8157067 5.112852665 8157067 1 0 1 0 0 0 3 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_8167215_8167477 2L 8167215 8167477 CG8498 CG8498 4890 1.088235294 8167309 1.905468026 8167309 3.434691745 8167309 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8168063_8168343 2L 8168063 8168343 CG8486 CG8486 4727 1.203781513 8168173 2.604263207 8168173 3.094043887 8168173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8208906_8209746 2L 8208906 8209746 CG8409 Su(var)205 1387 3.048319328 8209296 2.810009268 8209296 5.037617555 8209016 1 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8266339_8267011 2L 8266339 8267011 CG8049 Btk29A transcript overlap 1.853991597 8266838 6.064874884 8266838 9.258098224 8266838 0 1 1 0 0 0 4 2 0 0 0 0 5 1 1 0 0 0 0 0 0 0 0 0 2L_8287438_8288360 2L 8287438 8288360 CG8049 Btk29A transcript overlap 1.349789916 8287802 2.129749768 8287548 2.859979101 8287548 0 0 0 0 0 0 3 2 2 1 1 0 3 2 2 1 0 0 2 1 1 0 0 0 2L_8289910_8290137 2L 8289910 8290137 CG8049 Btk29A transcript overlap 1.453781513 8289993 2.372567192 8289993 1.789968652 8289993 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8302772_8302982 2L 8302772 8302982 CG7870 CG7870 transcript overlap 1.710084034 8302882 1.685820204 8302882 2.513061651 8302882 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_8348412_8348563 2L 8348412 8348563 CG7778 CG7778 transcript overlap 1.240546218 8348483 1.574606117 8348483 1.858934169 8348483 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8359253_8359785 2L 8359253 8359785 CG7627 CG7627 transcript overlap 1.141806723 8359339 2.853568119 8359339 2.821316614 8359339 0 0 0 0 0 0 3 3 1 1 0 0 3 2 1 0 0 0 2 2 2 2 0 0 2L_8376830_8377108 2L 8376830 8377108 CG17294 CG17294 TSS overlap 1.213235294 8377008 1.758109361 8377008 2.437826541 8377008 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8382855_8383417 2L 8382855 8383417 CG17295 CG17295 transcript overlap 2.109243697 8382895 2.859128823 8383035 4.399164054 8383035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_8384570_8385047 2L 8384570 8385047 CG13384 CG13384 transcript overlap 1.790966387 8384599 3.077849861 8384879 4.992685475 8384879 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8386868_8387402 2L 8386868 8387402 CG13384 CG13384 transcript overlap 1.765756303 8386978 3.139017609 8387258 3.990595611 8387258 0 0 0 0 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_8415689_8417207 2L 8415689 8417207 CG13388 Akap200 TSS overlap 3.316176471 8415719 6.024096386 8416588 9.234064786 8416588 1 0 1 0 0 0 2 1 1 0 0 0 2 2 1 0 0 0 0 0 0 0 0 0 2L_8478404_8478672 2L 8478404 8478672 CG33194 CheA29a 1055 1.007352941 8478514 2.30583874 8478514 2.770114943 8478514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8479185_8479730 2L 8479185 8479730 CG33194 CheA29a 1836 1.108193277 8479575 1.478220575 8479575 2.436781609 8479575 0 0 0 0 0 0 1 1 1 1 1 1 2 2 2 2 1 0 0 0 0 0 0 0 2L_8510501_8510780 2L 8510501 8510780 CG13096 CG13096 transcript overlap 0.851890756 8510611 2.288229842 8510611 3.118077325 8510611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8511864_8511970 2L 8511864 8511970 CG13096 CG13096 29 2.294117647 8511887 1.419833179 8511887 1.376175549 8511887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8521747_8522356 2L 8521747 8522356 CG10593 Acer TSS overlap 1.421218487 8521906 7.407784986 8521906 10.45768025 8521906 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_8545361_8546049 2L 8545361 8546049 CG18405 Sema-1a transcript overlap 1.352941176 8545954 2.552363299 8545751 3.526645768 8545751 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2L_8551226_8551634 2L 8551226 8551634 CG18405 Sema-1a transcript overlap 2.175420168 8551336 2.775718258 8551336 2.284221526 8551336 0 0 0 0 0 0 2 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 2L_8809697_8810218 2L 8809697 8810218 CG18024 SoxN 15407 1.707983193 8810056 3.574606117 8810056 5.76907001 8810056 0 1 1 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_8811323_8811835 2L 8811323 8811835 CG18024 SoxN 13790 1.888655462 8811433 1.915662651 8811433 2.571577847 8811433 0 0 0 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 1 1 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 2L_8825200_8825683 2L 8825200 8825683 CG18024 SoxN TSS overlap 2.121848739 8825590 2.411492122 8825310 2.026123302 8825590 0 0 0 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_8832084_8832897 2L 8832084 8832897 CG18024 SoxN 6459 2.74894958 8832448 4.892493049 8832448 6.539184953 8832448 1 0 1 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 3 1 1 1 0 0 0 0 0 0 0 0 1 1 1 0 0 0 2L_8838994_8839532 2L 8838994 8839532 CG18024 SoxN 13369 0.993697479 8839362 2.291010195 8839362 3.280041797 8839362 0 0 0 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 2 2 1 1 1 0 3 2 1 1 1 0 0 0 0 0 0 0 2L_8841307_8842609 2L 8841307 8842609 CG18024 SoxN 15682 4.200630252 8842161 9.721964782 8842161 13.74399164 8842161 1 0 1 0 0 1 "Cremazy et al., 2000; Stathopoulos et al., 2002 " 1 0 0 0 0 0 1 0 0 0 0 0 3 2 1 1 0 0 2L_8845744_8847674 2L 8845744 8847674 CG32986 CG32986 15133 1.870798319 8846094 5.980537535 8846920 8.614420063 8846920 0 1 1 0 0 0 1 0 0 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 2L_8848744_8850048 2L 8848744 8850048 CG32986 CG32986 12759 7.339285714 8849405 17.5931418 8849405 22.81295716 8849405 1 0 1 0 0 0 1 1 1 1 1 0 1 1 1 1 0 0 1 1 0 0 0 0 2L_8851973_8852518 2L 8851973 8852518 CG32986 CG32986 10289 1.769957983 8852355 3.204819277 8852355 3.732497388 8852355 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8872129_8872652 2L 8872129 8872652 CG9483 CG9483 5362 1.365546218 8872501 3.046339203 8872501 4.32183908 8872501 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_8875575_8876421 2L 8875575 8876421 CG9483 CG9483 8808 1.62605042 8875973 8.113994439 8875973 14.41065831 8875973 0 1 1 0 0 0 4 3 2 2 2 2 2 2 2 2 2 2 1 1 0 0 0 0 2L_8936699_8936966 2L 8936699 8936966 CG9496 Tsp29Fb 424 0.806722689 8936807 1.202965709 8936807 2.016718913 8936807 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_8954740_8955564 2L 8954740 8955564 CG31886 CG31886 transcript overlap 1.181722689 8954845 2.248378128 8955115 4.532915361 8955115 0 0 0 0 0 0 3 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_8957083_8957613 2L 8957083 8957613 CG31886 CG31886 transcript overlap 2.231092437 8957186 2.506024096 8957186 2.468129572 8957186 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2 1 1 0 0 0 2L_8991567_8991846 2L 8991567 8991846 CG9555 CG9555 217 1.660714286 8991676 2.09823911 8991676 2.516196447 8991676 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_9012355_9013850 2L 9012355 9013850 CG13102 CG13102 transcript overlap 1.49789916 9012728 7.359592215 9013289 9.257053292 9013289 0 1 1 0 0 0 6 3 3 1 0 0 5 2 2 0 0 0 0 0 0 0 0 0 2L_9087606_9088159 2L 9087606 9088159 CG18241 Toll-4 transcript overlap 0.987394958 9087709 1.930491196 9087989 2.816091954 9087989 0 0 0 0 0 0 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2L_9124441_9125027 2L 9124441 9125027 CG32982 CG32982 724 1.531512605 9124551 2.362372567 9124551 3.384535005 9124551 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_9126195_9126396 2L 9126195 9126396 CG32982 CG32982 transcript overlap 2.114495798 9126297 2.314179796 9126297 3.553814002 9126297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9137967_9138527 2L 9137967 9138527 CG32982 CG32982 transcript overlap 2.507352941 9138357 3.696014829 9138357 4.524555904 9138357 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2 1 0 0 0 0 2L_9144762_9147130 2L 9144762 9147130 CG32982 CG32982 transcript overlap 2.721638655 9145897 6.533827618 9146437 8.92476489 9146437 1 0 1 0 0 0 3 3 3 3 3 3 7 7 6 4 4 3 4 1 0 0 0 0 2L_9149812_9151396 2L 9149812 9151396 CG32982 CG32982 transcript overlap 2.165966387 9151237 4.381835032 9151097 3.44200627 9151097 0 0 0 0 0 0 5 2 2 2 2 1 5 5 5 5 4 2 1 0 0 0 0 0 2L_9158923_9159190 2L 9158923 9159190 CG32982 CG32982 transcript overlap 2.034663866 9159033 1.641334569 9159033 2.029258098 9159033 0 0 0 0 0 0 2 1 1 1 1 0 2 1 1 1 1 0 0 0 0 0 0 0 2L_9225856_9226479 2L 9225856 9226479 CG13109 tai transcript overlap 1.305672269 9226302 2.148285449 9226302 2.8892372 9226302 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 2L_9330734_9331084 2L 9330734 9331084 CG3738 Cks30A TSS overlap 2.143907563 9330775 1.795180723 9330914 2.905956113 9330914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_9421271_9421547 2L 9421271 9421547 CG3759 CG3759 transcript overlap 1.507352941 9421377 1.974050046 9421377 2.478578892 9421377 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_9431474_9431961 2L 9431474 9431961 CG3766 scat transcript overlap 1.557773109 9431654 4.21686747 9431654 6.808777429 9431654 0 1 1 0 0 0 1 1 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_9449057_9449577 2L 9449057 9449577 CG3779 numb transcript overlap 2.818277311 9449138 2.97497683 9449138 3.630094044 9449138 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_9452888_9453153 2L 9452888 9453153 CG3779 numb transcript overlap 1.201680672 9452984 1.525486562 9452984 2.357366771 9452984 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_9454180_9455027 2L 9454180 9455027 CG3779 numb transcript overlap 2.282563025 9454557 10.16496756 9454557 10.87147335 9454557 1 0 1 0 0 0 1 0 0 0 0 0 2 1 1 1 0 0 0 0 0 0 0 0 2L_9478057_9478336 2L 9478057 9478336 CG4422 Gdi 16591 1.871848739 9478167 1.198331789 9478167 1.847439916 9478167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_9485098_9485373 2L 9485098 9485373 CG4422 Gdi 9554 2.401260504 9485220 2.717330862 9485220 2.772204807 9485220 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9521228_9521872 2L 9521228 9521872 CG3811 Oatp30B transcript overlap 2.330882353 9521259 2.128822984 9521511 2.409613375 9521511 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_9567635_9568158 2L 9567635 9568158 CG3838 CG3838 734 1.317226891 9567992 2.290083411 9567992 2.997910136 9567992 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 2L_9570115_9570696 2L 9570115 9570696 CG3838 CG3838 transcript overlap 1.179621849 9570505 4.28544949 9570365 7.409613375 9570505 0 1 1 0 0 0 3 1 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 2L_9582891_9583673 2L 9582891 9583673 CG12245 gcm 1149 1.111344538 9583001 2.262279889 9583001 3.272727273 9583001 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_9585063_9585612 2L 9585063 9585612 CG12245 gcm 3321 1.102941176 9585453 2.043558851 9585453 2.149425287 9585173 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9601885_9602453 2L 9601885 9602453 CG4382 CG4382 993 1.546218487 9602285 4.020389249 9602285 5.739811912 9602285 0 1 1 0 0 0 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_9609665_9610003 2L 9609665 9610003 CG3858 gcm2 transcript overlap 1.962184874 9609845 3.481000927 9609845 5.011494253 9609845 0 1 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_9637194_9637731 2L 9637194 9637731 CG15828 CG15828 3619 1.156512605 9637286 2.338276182 9637286 3.684430512 9637286 0 0 0 0 0 0 3 2 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_9698558_9698869 2L 9698558 9698869 CG4379 Pka-C1 transcript overlap 1.842436975 9698769 2.775718258 9698629 3.757575758 9698629 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_9705429_9705856 2L 9705429 9705856 CG31710 CG3959 CG31710 pelo transcript overlap 3.142857143 9705768 2.2557924 9705768 3.058516196 9705539 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9709117_9709894 2L 9709117 9709894 CG4364 CG4364 transcript overlap 2.284663866 9709746 1.84244671 9709212 3.360501567 9709212 0 0 0 0 0 0 3 1 1 1 0 0 2 2 2 1 1 0 0 0 0 0 0 0 2L_9918192_9918730 2L 9918192 9918730 CG4598 CG4598 TSS overlap 3.455882353 9918231 1.998146432 9918492 4.102403344 9918492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9921653_9921791 2L 9921653 9921791 CG4592 CG4592 transcript overlap 1.901260504 9921692 1.871177016 9921692 2.576802508 9921692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_9938206_9939040 2L 9938206 9939040 CG4619 CG31713 CG4619 CG31713 TSS overlap 6.119747899 9938799 3.844300278 9938659 5.728317659 9938659 1 0 1 0 0 0 4 3 0 0 0 0 2 2 1 0 0 0 1 0 0 0 0 0 2L_9957050_9957587 2L 9957050 9957587 CG5846 CG5846 transcript overlap 1.578781513 9957206 2.827618165 9957311 4.981191223 9957311 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 1 1 0 2 0 0 0 0 0 2L_9984011_9984860 2L 9984011 9984860 CG4722 CG13130 bib CG13130 TSS overlap 11.36659664 9984121 3.258572753 9984690 5.390804598 9984690 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_9987858_9990262 2L 9987858 9990262 CG4722 bib transcript overlap 5.049369748 9988508 13.21964782 9988508 16.61755486 9988508 1 0 1 0 0 0 4 4 4 4 4 3 8 6 5 4 4 3 2 0 0 0 0 0 2L_9992433_9992965 2L 9992433 9992965 CG4722 bib transcript overlap 2.066176471 9992515 2.708063021 9992515 4.067920585 9992515 0 0 0 0 0 0 2 1 1 1 1 1 0 0 0 0 0 0 1 0 0 0 0 0 2L_10009725_10010178 2L 10009725 10010178 CG4758 Trp1 transcript overlap 1.442226891 10009835 2.331788693 10009835 2.247648903 10009835 0 0 0 0 0 0 3 2 2 1 1 0 1 1 1 1 0 0 2 0 0 0 0 0 2L_10058592_10059130 2L 10058592 10059130 CG4799 Pen transcript overlap 1.699579832 10058696 2.445783133 10058696 3.714733542 10058696 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_10103902_10104178 2L 10103902 10104178 CG13128 CG13128 transcript overlap 1.18592437 10104012 1.295644115 10104012 2.611285266 10104012 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_10210167_10210646 2L 10210167 10210646 CG5727 CG5727 transcript overlap 1.863445378 10210557 2.326227989 10210277 2.528735632 10210277 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 2L_10259818_10260388 2L 10259818 10260388 CG5671 Pten transcript overlap 1.404411765 10260218 3.840593142 10260072 4.805642633 10260218 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_10264484_10264727 2L 10264484 10264727 CG18619 CG18619 transcript overlap 1.853991597 10264594 3.003707136 10264594 5.108672936 10264594 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_10314002_10314254 2L 10314002 10314254 CG5384 CG5384 transcript overlap 1.783613445 10314112 1.203892493 10314112 1.175548589 10314112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_10339323_10339946 2L 10339323 10339946 CG5029 SamDC TSS overlap 3.06407563 10339370 3.023169601 10339496 5.034482759 10339496 1 0 1 0 0 0 3 0 0 0 0 0 5 2 0 0 0 0 0 0 0 0 0 0 2L_10341489_10341826 2L 10341489 10341826 CG31715 CG31715 TSS overlap 2.066176471 10341527 2.193697868 10341663 2.249738767 10341527 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_10396126_10396485 2L 10396126 10396485 CG5362 CG5362 TSS overlap 2.838235294 10396283 1.72381835 10396154 2.059561129 10396154 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_10397605_10398012 2L 10397605 10398012 CG31716 CG31716 transcript overlap 1.167016807 10397715 1.653382762 10397715 2.625914316 10397715 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_10418963_10419290 2L 10418963 10419290 CG5313 RfC3 TSS overlap 1.378151261 10419050 1.547729379 10419190 2.103448276 10419190 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_10515513_10515673 2L 10515513 10515673 CG7400 Fatp transcript overlap 0.610062893 10515580 0.787581699 10515580 0.972222222 10515580 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_10548614_10549385 2L 10548614 10549385 CG31721 Trim9 transcript overlap 2.140461216 10548937 4.230936819 10548937 7.276388889 10548937 1 0 1 0 0 1 "Biemar et al., 2006, based on in situs" 2 2 2 1 1 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_10609429_10609722 2L 10609429 10609722 CG31721 Trim9 transcript overlap 0.714884696 10609563 2.606753813 10609563 1.055555556 10609563 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_10611296_10612090 2L 10611296 10612090 CG31721 Trim9 transcript overlap 1.266247379 10611677 3.045751634 10611397 4.683333333 10611677 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 1 1 1 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 2L_10817594_10817884 2L 10817594 10817884 CG6713 Nos transcript overlap 0.721174004 10817714 2.605664488 10817714 3.081944444 10817714 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_10964419_10964997 2L 10964419 10964997 CG33129 CG33129 5278 1.795597484 10964536 3.104575163 10964816 4.241666667 10964816 0 0 0 0 0 0 2 1 0 0 0 0 3 2 2 1 0 0 2 0 0 0 0 0 2L_11070798_11071148 2L 11070798 11071148 CG14915 CG14915 TSS overlap 4.067085954 11070908 2.821350763 11070908 4.331944444 11070908 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_11081925_11082195 2L 11081925 11082195 CG14919 Ast-C 528 0.587002096 11082025 1.525054466 11082025 2.631944444 11082025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_11286685_11287214 2L 11286685 11287214 CG14925 Osi21 1082 1.875262055 11286795 3.310457516 11286795 3.726388889 11286795 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_11343860_11344136 2L 11343860 11344136 CG14926 CG14926 597 0.927672956 11343970 2.794117647 11343970 3.130555556 11343970 0 0 0 0 0 0 1 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_11445817_11446023 2L 11445817 11446023 CG6464 salm 214 1.344863732 11445853 1.388888889 11445853 1.684722222 11445853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_11447614_11448150 2L 11447614 11448150 CG6464 salm 2011 2.278825996 11447702 4.901960784 11447702 8.215277778 11447702 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_11455311_11455852 2L 11455311 11455852 CG6464 salm 9708 1.172955975 11455421 2.522875817 11455421 4.35 11455682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 2 2 0 2L_11485834_11486368 2L 11485834 11486368 CG4922 sala TSS overlap 2.115303983 11486198 4.37037037 11485944 6.776388889 11485944 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_11548537_11549101 2L 11548537 11549101 CG31706 CG31706 17488 0.79245283 11548931 1.550108932 11548931 2.944444444 11548722 0 0 0 0 0 0 4 4 1 0 0 0 4 2 2 0 0 0 0 0 0 0 0 0 2L_11793816_11794134 2L 11793816 11794134 CG14937 CG14937 TSS overlap 1.635220126 11793894 2.212418301 11793894 2.998611111 11793894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_11970677_11971482 2L 11970677 11971482 CR31863 bft TSS overlap 1.544025157 11971290 8.561002179 11971290 15.375 11971010 0 1 1 0 0 0 3 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_11977228_11978019 2L 11977228 11978019 CG16965 CG16965 3984 1.261006289 11977831 3.241830065 11977338 3.659722222 11977338 0 0 0 0 0 0 4 1 1 0 0 0 3 2 2 0 0 0 0 0 0 0 0 0 2L_11992877_11993439 2L 11992877 11993439 CG31866 CG31866 TSS overlap 1.364779874 11992901 3.010893246 11993182 3.872222222 11993286 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_11994498_11994832 2L 11994498 11994832 CG18789 CG18789 transcript overlap 1.35115304 11994570 1.983660131 11994570 3.436111111 11994570 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_11996781_11997283 2L 11996781 11997283 CG31865 CG31865 TSS overlap 1.379454927 11996802 2.576252723 11997114 4.1125 11997114 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_11998229_11998754 2L 11998229 11998754 CG18787 CG18787 transcript overlap 1.303983229 11998339 1.721132898 11998595 3.5 11998595 0 0 0 0 0 0 2 0 0 0 0 0 4 3 0 0 0 0 1 0 0 0 0 0 2L_12002877_12003792 2L 12002877 12003792 CG6746 CG6746 601 2.593291405 12003120 10.31154684 12003120 16.05277778 12003120 1 0 1 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_12007066_12007921 2L 12007066 12007921 CG5279 Rh5 455 2.174004193 12007731 5.074074074 12007451 11.25555556 12007451 1 0 1 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_12010444_12012582 2L 12010444 12012582 CG5279 Rh5 2068 2.072327044 12011395 5.015250545 12010554 6.991666667 12010831 1 0 1 0 0 0 5 3 3 2 2 1 5 2 0 0 0 0 0 0 0 0 0 0 2L_12079753_12080608 2L 12079753 12080608 CG14947 CG14947 2930 2.025157233 12080106 5.956427015 12080106 12.91666667 12080106 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_12081249_12081528 2L 12081249 12081528 CG6716 prd 4264 2.007337526 12081359 2.775599129 12081359 4.886111111 12081359 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12085328_12085869 2L 12085328 12085869 CG6716 prd TSS overlap 1.533542977 12085769 1.75708061 12085629 2.604166667 12085769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12092792_12093314 2L 12092792 12093314 CG5325 CG5325 457 1.610062893 12092900 3.704793028 12092900 3.202777778 12092900 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_12093644_12093979 2L 12093644 12093979 CG5325 CG5325 TSS overlap 1.858490566 12093679 1.603485839 12093809 3.026388889 12093679 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_12366066_12366307 2L 12366066 12366307 CG31761 bru-2 transcript overlap 2.052410901 12366137 2.623093682 12366137 4.186111111 12366137 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 1 1 0 0 0 0 0 0 2L_12457269_12458378 2L 12457269 12458378 CG5461 bun transcript overlap 1.50524109 12457411 4.027233115 12457929 6.543055556 12457929 0 1 1 0 0 1 "Biemar et al., 2006, based on in situs" 3 2 2 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_12459941_12460206 2L 12459941 12460206 CG5461 bun transcript overlap 1.440251572 12460042 2.061002179 12460042 3.588888889 12460042 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12461263_12461616 2L 12461263 12461616 CG5461 bun transcript overlap 2.190775681 12461443 2.776688453 12461443 3.141666667 12461443 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_12465846_12467121 2L 12465846 12467121 CG5461 bun transcript overlap 1.375262055 12466760 3.035947712 12466760 4.384722222 12466760 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 2 2 0 0 0 0 4 4 3 0 0 0 1 0 0 0 0 0 2L_12478523_12479064 2L 12478523 12479064 CG5461 bun transcript overlap 1.454926625 12478633 2.749455338 12478885 3.538888889 12478885 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 1 0 0 0 0 0 3 0 0 0 0 0 2L_12483586_12484081 2L 12483586 12484081 CG5461 bun transcript overlap 1.730607966 12483887 2.39869281 12483609 2.915277778 12483609 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_12507829_12508298 2L 12507829 12508298 CG5461 bun transcript overlap 1.497903564 12508142 2.322440087 12507939 3.729166667 12507939 0 0 0 0 0 1 "Biemar et al., 2006, based on in situs" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12662535_12663319 2L 12662535 12663319 CG12287 pdm2 transcript overlap 1.185534591 12662925 2.430283224 12663177 3.344444444 12663177 0 0 0 0 0 0 2 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_12665974_12666528 2L 12665974 12666528 CG12287 pdm2 transcript overlap 2.248427673 12666358 3.648148148 12666358 5.805555556 12666078 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 1 0 0 0 0 2L_12679319_12679873 2L 12679319 12679873 CG12287 pdm2 transcript overlap 1.596436059 12679439 4.204793028 12679439 6.615277778 12679439 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12769126_12769394 2L 12769126 12769394 CG15483 CG15483 7286 2.174004193 12769236 3.9291939 12769236 6.458333333 12769236 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_12814567_12814857 2L 12814567 12814857 CG12283 kek1 7930 0.897274633 12814687 0.861655773 12814687 0.801388889 12814687 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_12846913_12847710 2L 12846913 12847710 CG12283 kek1 24126 1.486373166 12847303 4.769063181 12847303 5.618055556 12847303 0 1 1 0 0 0 4 3 3 3 2 2 5 4 4 4 4 4 1 0 0 0 0 0 2L_12859142_12859659 2L 12859142 12859659 CG12283 kek1 36355 1.537735849 12859489 3.781045752 12859489 3.2625 12859489 0 0 0 0 0 0 2 2 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_12899413_12899653 2L 12899413 12899653 CG5983 ACXC 12877 1.509433962 12899516 2.75708061 12899516 4.608333333 12899516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_13004453_13005010 2L 13004453 13005010 CG5092 Tor TSS overlap 1.222222222 13004560 2.905228758 13004560 4.226388889 13004840 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_13126112_13126925 2L 13126112 13126925 CG5122 CG5122 3688 1.041928721 13126478 3.093681917 13126478 4.948611111 13126478 0 0 0 0 0 0 3 3 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 2L_13211776_13212093 2L 13211776 13212093 CG15482 CG15482 TSS overlap 1.992662474 13211817 1.881263617 13211958 3.765277778 13211958 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_13215936_13216142 2L 13215936 13216142 CR31854 snRNA:U2:34ABb 97 2.056603774 13216022 1.996732026 13216022 3.954166667 13216022 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_13224850_13225952 2L 13224850 13225952 CG15480 CG15480 TSS overlap 4.137316562 13225782 10.80065359 13225502 15.61944444 13225502 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 2L_13226921_13228034 2L 13226921 13228034 CG16813 CG16813 TSS overlap 3.462264151 13227586 8.187363834 13227306 12.95277778 13227306 1 0 1 0 0 0 3 2 2 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_13229160_13229972 2L 13229160 13229972 CG16815 CG16815 TSS overlap 1.458071279 13229277 3.586056645 13229803 6.281944444 13229803 0 1 1 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 2L_13234099_13234379 2L 13234099 13234379 CG15479 CG15479 transcript overlap 1.135220126 13234209 2.455337691 13234209 3.477777778 13234209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_13234683_13235338 2L 13234683 13235338 CG15479 CG15479 88 1.471698113 13235192 3.041394336 13234988 4.608333333 13234988 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_13515402_13515652 2L 13515402 13515652 CG9239 B4 transcript overlap 1.266247379 13515512 3.315904139 13515512 4.315277778 13515512 0 0 0 0 0 0 2 1 0 0 0 0 4 3 1 1 0 0 0 0 0 0 0 0 2L_13597092_13597892 2L 13597092 13597892 CG7147 kuz transcript overlap 2.667714885 13597473 5.665577342 13597473 6.7875 13597473 1 0 1 0 0 0 1 0 0 0 0 0 3 2 2 2 0 0 2 0 0 0 0 0 2L_13665816_13666342 2L 13665816 13666342 CG18507 CG18507 transcript overlap 1.226415094 13666184 2.85620915 13666184 5.016666667 13666184 0 1 1 0 0 0 2 2 2 2 2 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_13671950_13672218 2L 13671950 13672218 CG18507 CG18507 6422 2.156184486 13672049 3.206971678 13672049 4.647222222 13672049 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 1 2 0 0 0 0 0 2L_13850664_13851766 2L 13850664 13851766 CG31811 cenG1A transcript overlap 1.796645702 13851317 4.5708061 13851317 6.765277778 13851317 0 1 1 0 0 0 1 0 0 0 0 0 3 2 2 2 1 0 1 0 0 0 0 0 2L_13867435_13868230 2L 13867435 13868230 CG31811 cenG1A transcript overlap 2.831236897 13867824 5.696078431 13867824 9.476388889 13867824 1 0 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_13869344_13869898 2L 13869344 13869898 CG31811 cenG1A transcript overlap 1.141509434 13869454 2.078431373 13869454 3.077777778 13869454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_13964074_13964317 2L 13964074 13964317 CG33119 CG33119 transcript overlap 1.061844864 13964173 2.169934641 13964173 3.733333333 13964173 0 0 0 0 0 0 2 2 2 2 1 0 2 2 2 2 0 0 0 0 0 0 0 0 2L_14023983_14024718 2L 14023983 14024718 CG31840 CG31840 TSS overlap 2.0639413 14024243 3.885620915 14024574 5.611111111 14024574 1 0 1 0 0 0 2 2 2 1 1 1 5 4 3 1 1 1 0 0 0 0 0 0 2L_14025760_14028042 2L 14025760 14028042 CG4500 CG4500 TSS overlap 3.980083857 14027320 5.38453159 14025867 6.738888889 14025867 1 0 1 0 0 0 0 0 0 0 0 0 8 3 2 1 0 0 2 1 1 1 0 0 2L_14040110_14040968 2L 14040110 14040968 CG31771 CG31771 transcript overlap 1.129979036 14040219 2.166666667 14040824 2.798611111 14040219 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_14261570_14263064 2L 14261570 14263064 CG15288 wb 458 7.031446541 14262253 28.4956427 14262253 31.8125 14262253 1 0 1 0 0 0 3 2 2 1 1 0 3 3 2 0 0 0 1 1 1 1 1 0 2L_14264719_14265615 2L 14264719 14265615 CG15288 wb transcript overlap 1.704402516 14265217 8.691721133 14265217 11.26944444 14265217 0 1 1 0 0 0 1 1 0 0 0 0 3 3 3 3 2 0 1 1 1 0 0 0 2L_14303810_14304092 2L 14303810 14304092 CG15288 wb transcript overlap 1.693920335 14303936 1.495642702 14303936 2.386111111 14303936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_14383965_14384197 2L 14383965 14384197 CG3478 ppk 2795 0.950733753 14384036 2.715686275 14384036 4.55 14384036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 2L_14430023_14430570 2L 14430023 14430570 CG3474 CG3474 4892 1.397274633 14430400 2.503267974 14430145 3.601388889 14430400 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 0 0 0 2L_14434605_14434870 2L 14434605 14434870 CG3474 CG3474 9474 1.374213836 14434715 2.862745098 14434715 2.880555556 14434715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_14435724_14436263 2L 14435724 14436263 CG3474 CG3474 10593 2.380503145 14436093 4.60130719 14436093 6.573611111 14436093 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_14443525_14444364 2L 14443525 14444364 CG15283 CG15283 6452 2.085953878 14444194 5.32788671 14444194 6.704166667 14444194 1 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_14445434_14446499 2L 14445434 14446499 CG15283 CG15283 4317 1.701257862 14445795 10.583878 14445795 16.72361111 14445795 0 1 1 0 0 0 2 2 2 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_14464716_14464991 2L 14464716 14464991 CG15283 CG15283 13900 1.303983229 14464826 2.513071895 14464826 3.495833333 14464826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_14478327_14478596 2L 14478327 14478596 CG4491 noc 12266 0.381551363 14478429 2.62962963 14478429 0.515277778 14478429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_14484754_14486652 2L 14484754 14486652 CG4491 noc 4210 2.012578616 14486482 4.387799564 14486254 6.741666667 14486254 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_14489015_14489519 2L 14489015 14489519 CG4491 noc 1343 2.29769392 14489374 3.264705882 14489374 6.029166667 14489374 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_14490561_14491118 2L 14490561 14491118 CG4491 noc TSS overlap 2.384696017 14490671 3.446623094 14490671 5.051388889 14490671 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_14517312_14517901 2L 14517312 14517901 CR31977 tRNA:G3:35Ba 190 1.151991614 14517702 2.960784314 14517422 2.627777778 14517422 0 0 0 0 0 0 1 0 0 0 0 0 2 2 0 0 0 0 1 1 0 0 0 0 2L_14554767_14555046 2L 14554767 14555046 CG4218 CG4218 5692 1.647798742 14554877 2.793028322 14554877 3.440277778 14554877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_14577136_14577687 2L 14577136 14577687 CG3473 CG3473 13410 1.078616352 14577518 3.320261438 14577246 4.552777778 14577246 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_14585001_14585514 2L 14585001 14585514 CR31983 tRNA:P:35Ba 13345 1.784067086 14585356 3.362745098 14585108 3.805555556 14585108 0 0 0 0 0 0 1 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_14736034_14736233 2L 14736034 14736233 CG31835 CG31835 transcript overlap 1.460167715 14736074 2.387799564 14736074 5.008333333 14736074 0 1 1 0 0 0 2 2 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 2L_15052679_15053683 2L 15052679 15053683 CG7595 ck transcript overlap 1.908805031 15053102 2.979302832 15053102 4.431944444 15053319 0 0 0 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_15063953_15064211 2L 15063953 15064211 CG4170 CG3506 vig vas transcript overlap 4.378406709 15064123 2.608932462 15064007 1.204166667 15064123 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_15306760_15307319 2L 15306760 15307319 CG15259 nht 8516 1.765199161 15307150 2.40087146 15307150 4.176388889 15307150 0 0 0 0 0 0 2 1 1 1 1 0 2 1 1 1 0 0 2 1 0 0 0 0 2L_15309827_15310082 2L 15309827 15310082 CG15259 nht 5753 1.024109015 15309935 1.775599129 15309935 2.256944444 15309935 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_15315952_15316123 2L 15315952 15316123 CG15259 nht 117 1.323899371 15315974 3.151416122 15315974 4.683333333 15315974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_15319256_15319501 2L 15319256 15319501 CG15259 nht 3421 0.937106918 15319363 2.588235294 15319363 4.384722222 15319363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 2L_15320030_15320870 2L 15320030 15320870 CG15259 nht 4195 1.636268344 15320700 5.966230937 15320700 8.281944444 15320700 0 1 1 0 0 0 3 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_15321924_15322204 2L 15321924 15322204 CG15259 nht 6089 1.056603774 15322034 3.324618736 15322034 3.3625 15322034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_15329055_15329954 2L 15329055 15329954 CG3758 esg TSS overlap 2.139412998 15329854 4.502178649 15329434 6.247222222 15329714 1 0 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_15471864_15476418 2L 15471864 15476418 CG3956 sna TSS overlap 8.214884696 15475689 12.10893246 15475689 19.23611111 15475689 1 0 1 1 0 1 "Ip et al., 1992" 2 2 2 1 1 0 5 3 3 1 0 0 10 2 1 1 0 0 2L_15478046_15478590 2L 15478046 15478590 CG15257 Tim17b2 2107 1.820754717 15478156 3.852941176 15478156 4.809722222 15478422 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_15481464_15483061 2L 15481464 15483061 CG15257 Tim17b2 transcript overlap 6.761006289 15482028 20.67647059 15481754 31.43055556 15481754 1 0 1 0 0 0 4 4 1 0 0 0 8 7 5 4 0 0 2 1 0 0 0 0 2L_15486876_15488634 2L 15486876 15488634 CG15257 Tim17b2 transcript overlap 4.609014675 15488464 6.849673203 15488464 9.151388889 15488464 1 0 1 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 6 1 1 1 0 0 2L_15561972_15562512 2L 15561972 15562512 CG4192 kek3 12370 1.230607966 15562080 5.910675381 15562080 9.354166667 15562080 0 1 1 0 0 0 5 3 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_15652507_15653063 2L 15652507 15653063 CG31825 CG31825 transcript overlap 1.176100629 15652614 2.297385621 15652893 3.326388889 15652614 0 0 0 0 0 0 1 1 0 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 2L_15686104_15686660 2L 15686104 15686660 CG33311 CG33311 transcript overlap 1.087002096 15686211 2.862745098 15686490 4.381944444 15686490 0 0 0 0 0 0 1 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_15725797_15726075 2L 15725797 15726075 CG3938 CycE transcript overlap 2.052410901 15725905 1.720043573 15725905 3.295833333 15725905 0 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_15731877_15732313 2L 15731877 15732313 CG3938 CycE transcript overlap 3.585953878 15731959 4.298474946 15731959 4.620833333 15731959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 2L_15736900_15737999 2L 15736900 15737999 CG3938 CycE transcript overlap 1.497903564 15737831 3.442265795 15737010 4.275 15737831 0 0 0 0 0 0 4 4 4 4 0 0 3 3 3 2 1 1 0 0 0 0 0 0 2L_15738595_15739429 2L 15738595 15739429 CG3938 CycE transcript overlap 1.306079665 15738984 3.328976035 15739264 4.0625 15739264 0 0 0 0 0 0 1 0 0 0 0 0 4 2 1 0 0 0 1 0 0 0 0 0 2L_15743545_15744042 2L 15743545 15744042 CG3938 CycE transcript overlap 1.899371069 15743934 4.4291939 15743654 6.729166667 15743654 0 1 1 0 0 0 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_15757333_15758187 2L 15757333 15758187 CG3903 Gli transcript overlap 1.214884696 15757719 3.440087146 15758001 3.633333333 15757719 0 0 0 0 0 0 4 3 2 2 1 1 7 1 0 0 0 0 0 0 0 0 0 0 2L_15758327_15758542 2L 15758327 15758542 CG3903 Gli transcript overlap 1.629979036 15758379 1.920479303 15758379 2.781944444 15758379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_15992639_15993070 2L 15992639 15993070 CG4838 beat-Ic 3396 0.668763103 15992910 1.984749455 15992728 1.295833333 15992910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_16230617_16231434 2L 16230617 16231434 CG12455 CG12455 transcript overlap 1.002096436 16230984 6.864923747 16230984 9.731944444 16230984 0 1 1 0 0 0 5 4 2 2 2 1 3 3 3 3 2 1 1 0 0 0 0 0 2L_16247250_16247740 2L 16247250 16247740 CG4993 PRL-1 transcript overlap 1.291404612 16247640 1.744008715 16247360 3.305555556 16247640 0 0 0 0 0 0 1 1 0 0 0 0 2 2 1 1 1 1 0 0 0 0 0 0 2L_16264603_16265119 2L 16264603 16265119 CG7664 crp transcript overlap 1.236897275 16264967 2.204793028 16264967 3.275 16264967 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_16275721_16276346 2L 16275721 16276346 CG7664 crp transcript overlap 2.056603774 16276066 3.693899782 16276066 5.219444444 16276066 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_16277127_16278640 2L 16277127 16278640 CG7664 crp transcript overlap 2.764150943 16277347 5.54248366 16277347 6.447222222 16277347 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_16315547_16316350 2L 16315547 16316350 CG5848 cact transcript overlap 2.744234801 16315900 3.425925926 16315900 4.508333333 16315900 0 0 0 0 0 0 0 0 0 0 0 0 4 1 1 0 0 0 3 1 1 0 0 0 2L_16319162_16319990 2L 16319162 16319990 CG5848 cact transcript overlap 4.606918239 16319549 11.85294118 16319549 16.82361111 16319549 1 0 1 0 0 0 2 2 1 1 1 0 2 2 2 2 2 2 1 1 1 1 1 1 2L_16321477_16322126 2L 16321477 16322126 CG5848 cact TSS overlap 2.57442348 16321886 2.338779956 16321606 2.848611111 16322026 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_16325727_16326383 2L 16325727 16326383 CG4440 CG4440 TSS overlap 2.117400419 16325897 6.628540305 16326177 7.752777778 16326177 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_16481918_16482112 2L 16481918 16482112 CG4952 dac 5 1.734800839 16481958 2.239651416 16481958 2.915277778 16481958 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_16584404_16584828 2L 16584404 16584828 CG31815 CG31815 13014 1.333333333 16584478 2.34204793 16584696 3.501388889 16584478 0 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_16639236_16639985 2L 16639236 16639985 CG31738 CG31738 transcript overlap 1.591194969 16639553 2.862745098 16639553 6 16639553 0 1 1 0 0 0 3 3 2 0 0 0 3 2 2 0 0 0 1 0 0 0 0 0 2L_16724988_16725445 2L 16724988 16725445 CG31782 CG31782 transcript overlap 1.182389937 16725347 4.664488017 16725067 0.979166667 16725347 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2L_16741976_16742895 2L 16741976 16742895 CG17912 CG17912 2643 2.799790356 16742429 10.90631808 16742429 16.96111111 16742429 1 0 1 0 0 0 3 2 2 1 1 1 0 0 0 0 0 0 4 1 1 0 0 0 2L_17217370_17218981 2L 17217370 17218981 CG15138 beat-IIIc transcript overlap 1.605870021 17218542 4.125272331 17218286 6.976388889 17218286 0 1 1 0 0 0 2 2 1 1 0 0 3 2 1 1 1 0 1 1 0 0 0 0 2L_17248872_17249533 2L 17248872 17249533 CG15138 beat-IIIc transcript overlap 1.131027254 17249465 2.131808279 17249262 4.694444444 17248982 0 0 0 0 0 0 5 4 1 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 2L_17259161_17259682 2L 17259161 17259682 CG15138 beat-IIIc 2500 1.011530398 17259270 5.910675381 17259270 8.963888889 17259543 0 1 1 0 0 0 2 2 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_17262358_17263147 2L 17262358 17263147 CG15138 beat-IIIc 5697 1.51048218 17262680 3.276688453 17262680 4.445833333 17262680 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2L_17378176_17378962 2L 17378176 17378962 CG6860 CG6860 transcript overlap 6.225366876 17378542 12.52614379 17378542 19.53472222 17378542 1 0 1 0 0 0 2 1 0 0 0 0 2 2 1 0 0 0 2 1 0 0 0 0 2L_17379458_17379734 2L 17379458 17379734 CG6860 CG6860 transcript overlap 1.917190776 17379564 2.427015251 17379564 3.5125 17379564 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_17606556_17607335 2L 17606556 17607335 CG15147 CG15147 14939 1.332285115 17607195 3.716775599 17607195 6.606944444 17606942 0 1 1 0 0 0 3 2 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2L_17731432_17731957 2L 17731432 17731957 CG7100 CadN transcript overlap 2.754716981 17731810 2.850762527 17731810 3.216666667 17731810 0 0 0 0 0 1 "Biemar et al., 2006" 1 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 2L_17735126_17735665 2L 17735126 17735665 CG7100 CadN TSS overlap 1.511530398 17735236 1.879084967 17735366 3.284722222 17735366 0 0 0 0 0 1 "Biemar et al., 2006" 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_17736167_17736696 2L 17736167 17736696 CG7100 CadN 717 2.497903564 17736526 3.464052288 17736526 3.533333333 17736526 0 0 0 0 0 1 "Biemar et al., 2006" 0 0 0 0 0 0 1 1 1 0 0 0 3 3 1 0 0 0 2L_17739461_17740256 2L 17739461 17740256 CG7100 CadN 4011 1.590146751 17740095 2.758169935 17739842 4.963888889 17739842 0 0 0 0 0 1 "Biemar et al., 2006" 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_17744588_17745109 2L 17744588 17745109 CG7100 CadN 9138 2.551362683 17744939 6.737472767 17744696 4.752777778 17744939 1 0 1 0 0 1 "Biemar et al., 2006" 2 1 1 1 0 0 2 2 2 2 0 0 0 0 0 0 0 0 2L_17746765_17747317 2L 17746765 17747317 CG7100 CadN 11315 2.107966457 17747147 3.496732026 17747147 5.034722222 17747147 1 0 1 0 0 1 "Biemar et al., 2006" 0 0 0 0 0 0 1 1 1 1 0 0 1 0 0 0 0 0 2L_17751289_17751842 2L 17751289 17751842 CG7100 CadN 15839 2.677148847 17751672 4.160130719 17751672 2.933333333 17751672 0 0 0 0 0 1 "Biemar et al., 2006" 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2L_18073807_18074363 2L 18073807 18074363 CG5711 Arr1 TSS overlap 1.509433962 18074055 2.511982571 18074055 3.536111111 18074055 0 0 0 0 0 0 2 1 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2L_18087592_18088419 2L 18087592 18088419 CG15153 CG15153 TSS overlap 1.402515723 18088096 3.20043573 18088096 5.538888889 18088096 0 1 1 0 0 0 7 3 3 0 0 0 3 2 2 1 1 0 1 0 0 0 0 0 2L_18329537_18330079 2L 18329537 18330079 CG5803 Fas3 transcript overlap 1.895178197 18329908 4.874727669 18329908 7.861111111 18329908 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_18350299_18350808 2L 18350299 18350808 CG5803 Fas3 transcript overlap 1.246331237 18350638 3.44335512 18350638 5.630555556 18350638 0 1 1 0 0 0 3 3 0 0 0 0 2 2 0 0 0 0 2 2 2 0 0 0 2L_18353571_18354394 2L 18353571 18354394 CG5803 CG7157 Fas3 Acp36DE transcript overlap 3.344863732 18353677 2.694989107 18354224 4.813888889 18354224 0 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_18357149_18357692 2L 18357149 18357692 CG5803 Fas3 transcript overlap 1.977987421 18357256 5.41503268 18357256 5.075 18357256 0 1 1 0 0 0 1 1 1 0 0 0 2 1 1 1 1 0 0 0 0 0 0 0 2L_18399301_18399591 2L 18399301 18399591 CG31749 CG31749 17058 0.893081761 18399410 3.169934641 18399410 5.805555556 18399410 0 1 1 0 0 0 2 2 0 0 0 0 2 2 0 0 0 0 1 0 0 0 0 0 2L_18476223_18476740 2L 18476223 18476740 CG10283 CG10283 transcript overlap 1.689727463 18476327 2.577342048 18476327 4.411111111 18476327 0 0 0 0 0 0 1 1 0 0 0 0 1 1 1 0 0 0 2 1 1 0 0 0 2L_18479883_18480328 2L 18479883 18480328 CG10283 CG10283 transcript overlap 2.095387841 18479987 3.427015251 18479987 4.356944444 18479987 0 0 0 0 0 0 2 2 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2L_18482553_18483320 2L 18482553 18483320 CG10176 CG10176 transcript overlap 2.678197065 18482918 4.734204793 18482918 6.975 18482918 1 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 2L_18519166_18519604 2L 18519166 18519604 CG10211 CG10211 transcript overlap 1.085953878 18519276 2.236383442 18519276 2.915277778 18519514 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 2L_18611752_18613400 2L 18611752 18613400 CG15161 CG15162 CG15161 MESR3 TSS overlap 2.047169811 18611998 9.519607843 18611862 15.4125 18611862 1 0 1 0 0 0 3 1 0 0 0 0 3 1 0 0 0 0 1 1 0 0 0 0 2L_18648436_18648915 2L 18648436 18648915 CG15162 MESR3 transcript overlap 3.327044025 18648826 3.976034858 18648826 3.747222222 18648826 0 0 0 0 0 0 0 0 0 0 0 0 2 2 2 2 0 0 1 1 0 0 0 0 2L_18761202_18761716 2L 18761202 18761716 CG31753 ham transcript overlap 1.245283019 18761582 1.932461874 18761582 3.744444444 18761582 0 0 0 0 0 0 3 1 1 1 0 0 3 1 0 0 0 0 0 0 0 0 0 0 2L_18803626_18804185 2L 18803626 18804185 CG10570 CG10570 2730 1.535639413 18804015 3.608932462 18803735 4.620833333 18803735 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 1 1 1 1 0 0 0 0 0 2L_18804738_18805018 2L 18804738 18805018 CG10570 CG10570 1897 0.958071279 18804848 2.076252723 18804848 3.016666667 18804848 0 0 0 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2L_18826366_18826822 2L 18826366 18826822 CG17597 CG17597 transcript overlap 10.66352201 18826687 1.923747277 18826436 3.013888889 18826436 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_18870798_18872110 2L 18870798 18872110 CG10619 tup transcript overlap 1.678197065 18871188 5.958605664 18871188 8.405555556 18871414 0 1 1 0 1 1 "Frank and Rushlow, 1996" 4 3 1 1 1 0 2 0 0 0 0 0 2 1 1 0 0 0 2L_18877093_18877657 2L 18877093 18877657 CG10619 tup TSS overlap 3.393081761 18877133 7.964052288 18877487 14.52222222 18877487 1 0 1 0 0 1 "Frank and Rushlow, 1996" 1 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2L_18891098_18891898 2L 18891098 18891898 CG10619 tup 13913 1.363731656 18891208 4.562091503 18891488 8.205555556 18891488 0 1 1 0 0 1 "Frank and Rushlow, 1996" 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_18972889_18973169 2L 18972889 18973169 CG10431 CG10431 1988 1.51572327 18972999 1.847494553 18972999 3.093055556 18972999 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19130946_19131212 2L 19130946 19131212 CG10719 brat transcript overlap 5.881551363 19131056 3.138344227 19131056 1.893055556 19131056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19150491_19151491 2L 19150491 19151491 CG10719 brat transcript overlap 3.900419287 19151150 6.992374728 19150870 12.42638889 19150870 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_19151865_19152911 2L 19151865 19152911 CG10719 brat transcript overlap 1.987421384 19152254 4.145969499 19152254 6.225 19152254 0 1 1 0 0 0 3 1 1 0 0 0 3 1 1 0 0 0 2 0 0 0 0 0 2L_19153994_19155006 2L 19153994 19155006 CG10719 brat transcript overlap 11.43920335 19154424 2.767973856 19154809 4.843055556 19154809 0 0 0 0 0 0 2 1 1 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2L_19156906_19157446 2L 19156906 19157446 CG10719 brat transcript overlap 1.84591195 19157296 3.468409586 19157296 6.625 19157296 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19158479_19158977 2L 19158479 19158977 CG10719 brat transcript overlap 1.401467505 19158807 2.160130719 19158571 3.798611111 19158571 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_19160543_19161270 2L 19160543 19161270 CG10719 brat transcript overlap 3.077568134 19160642 2.114379085 19160642 2.872222222 19160880 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 2L_19176986_19177452 2L 19176986 19177452 CG17568 CG17568 transcript overlap 1.048218029 19177352 2.966230937 19177096 3.3 19177352 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2L_19200905_19201460 2L 19200905 19201460 CG17348 drl transcript overlap 1.289308176 19201015 2.850762527 19201015 3.977777778 19201015 0 0 0 0 0 0 1 1 1 1 0 0 2 2 2 0 0 0 0 0 0 0 0 0 2L_19215521_19216607 2L 19215521 19216607 CG17348 drl 29246 1.408805031 19215884 5.061002179 19216159 8.390277778 19216159 0 1 1 0 0 0 5 3 2 2 2 1 1 1 1 1 1 0 2 0 0 0 0 0 2L_19318534_19319091 2L 19318534 19319091 CG10750 CG10750 22299 1.352201258 19318644 3.410675381 19318644 3.834722222 19318644 0 0 0 0 0 0 1 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2L_19322645_19323205 2L 19322645 19323205 CG10750 CG10750 26410 2.756813417 19322755 5.74291939 19322755 8.254166667 19322755 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_19329820_19330350 2L 19329820 19330350 CG17559 dnt 28803 2.374213836 19330194 2.65577342 19330194 3.316666667 19329928 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19333384_19334717 2L 19333384 19334717 CG17559 dnt 24436 3.153039832 19334299 6.08496732 19334050 9.191666667 19334050 1 0 1 0 0 0 5 3 2 1 1 0 1 1 1 0 0 0 2 0 0 0 0 0 2L_19485836_19486178 2L 19485836 19486178 CG10194 CG10194 TSS overlap 1.880503145 19486016 2.252723312 19486016 3.213888889 19486016 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_19503996_19504725 2L 19503996 19504725 CG10188 CG10188 TSS overlap 2.939203354 19504623 3.71459695 19504106 6.1625 19504343 1 0 1 0 0 0 2 0 0 0 0 0 2 2 1 1 0 0 3 1 1 0 0 0 2L_19572083_19572653 2L 19572083 19572653 CG10334 spi transcript overlap 2.201257862 19572471 2.366013072 19572193 3.533333333 19572471 0 0 0 0 0 0 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19639429_19639703 2L 19639429 19639703 CG10443 Lar transcript overlap 1.899371069 19639536 2.736383442 19639536 2.272222222 19639536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_19643619_19643961 2L 19643619 19643961 CG10443 Lar transcript overlap 1.323899371 19643707 3.735294118 19643795 4.680555556 19643795 0 0 0 0 0 0 3 3 1 1 0 0 3 1 1 1 0 0 0 0 0 0 0 0 2L_19807969_19808510 2L 19807969 19808510 CR32881 snRNA:U5:38ABa TSS overlap 0.932914046 19808352 3.446623094 19808352 1.756944444 19808352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_19811161_19812738 2L 19811161 19812738 CR32882 CR32880 snRNA:U2:38ABa snRNA:U5:38ABb TSS overlap 2.192872117 19811584 1.927015251 19811864 3.773611111 19811584 0 0 0 0 0 0 2 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 2L_19815623_19816192 2L 19815623 19816192 CR32880 snRNA:U5:38ABb 3280 1.363731656 19816022 4.64379085 19815742 7.7875 19816022 0 1 1 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 2L_19862603_19863138 2L 19862603 19863138 CG33316 CG33316 transcript overlap 1.742138365 19862711 2.74291939 19862968 4.433333333 19862711 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_19933923_19934203 2L 19933923 19934203 CG33316 CG33316 transcript overlap 0.919287212 19934033 2.446623094 19934033 3.718055556 19934033 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_19947602_19948086 2L 19947602 19948086 CG10662 CG10662 2238 1.542976939 19947923 5.887799564 19947700 4.606944444 19947700 0 1 1 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 2L_20026593_20026850 2L 20026593 20026850 CG13968 sNPF transcript overlap 1.039832285 20026703 1.997821351 20026703 2.788888889 20026703 0 0 0 0 0 0 2 2 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 2L_20124023_20124583 2L 20124023 20124583 CG10651 CG10651 6247 2.008385744 20124413 5.049019608 20124413 6.998611111 20124413 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_20281449_20281946 2L 20281449 20281946 CG12617 CG12617 354 2.113207547 20281555 3.027233115 20281779 4.902777778 20281555 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_20464172_20464980 2L 20464172 20464980 CR32958 mir-1 10109 1.480083857 20464535 4.423747277 20464535 4.9625 20464535 0 0 0 0 0 1 "Biemar et al., 2005" 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_20468594_20469458 2L 20468594 20469458 CR32958 mir-1 5631 2.024109015 20468984 12.58932462 20468984 11.67222222 20468984 1 0 1 1 0 1 "Biemar et al., 2005" 3 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 2L_20473425_20476067 2L 20473425 20476067 CR32958 mir-1 TSS overlap 7.963312369 20475901 18.85185185 20473789 14.16111111 20473789 1 0 1 0 0 1 "Biemar et al., 2005" 3 0 0 0 0 0 7 0 0 0 0 0 2 0 0 0 0 0 2L_20481988_20482424 2L 20481988 20482424 CG34007 CG34007 275 2.520964361 20482098 2.82788671 20482098 3.045833333 20482098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_20756026_20756566 2L 20756026 20756566 CG1759 cad 1762 1.36163522 20756398 2.974945534 20756398 4.455555556 20756398 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 0 0 2 0 0 0 0 0 2L_20757727_20758301 2L 20757727 20758301 CG1759 cad 27 2.874213836 20758192 3.159041394 20758070 4.747222222 20758070 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_20765933_20766465 2L 20765933 20766465 CG1759 cad transcript overlap 1.56918239 20766323 4.227668845 20766043 6.745833333 20766043 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_20956296_20957091 2L 20956296 20957091 CG9266 CG9266 TSS overlap 1.514675052 20956955 2.468409586 20956534 3.141666667 20956675 0 0 0 0 0 0 1 1 1 1 0 0 1 1 1 1 1 0 0 0 0 0 0 0 2L_21021770_21022301 2L 21021770 21022301 CG1762 betaInt-nu 18124 1.670859539 21022131 3.918300654 21021879 3.602777778 21021879 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2L_21023629_21023903 2L 21023629 21023903 CG1762 betaInt-nu 16522 1.677148847 21023739 2.944444444 21023739 2.790277778 21023739 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 2L_21089926_21090976 2L 21089926 21090976 CG12050 CG9257 CG12050 CG9257 TSS overlap 4.417190776 21090526 8.565359477 21090526 14.22361111 21090526 1 0 1 0 0 0 2 1 1 1 0 0 2 2 1 1 0 0 1 0 0 0 0 0 2L_21092016_21092614 2L 21092016 21092614 CG9256 Nhe2 TSS overlap 2.174004193 21092166 2.037037037 21092166 2.820833333 21092166 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 2L_21150347_21150681 2L 21150347 21150681 CG9247 CG9247 TSS overlap 2.313417191 21150582 4.087145969 21150582 5.541666667 21150582 1 0 1 0 0 0 3 2 1 1 0 0 2 1 1 0 0 0 1 0 0 0 0 0 2L_21225246_21225992 2L 21225246 21225992 CG8676 Hr39 transcript overlap 2.019916143 21225554 6.859477124 21225554 11.61944444 21225554 1 0 1 0 0 0 4 3 2 0 0 0 2 1 1 0 0 0 1 0 0 0 0 0 2L_21406221_21406485 2L 21406221 21406485 CG33910 CR33802 His2B:CG33910 His-Psi:CR33802 TSS overlap 33.23319756 21406287 1.385 21406287 2.168407311 21406287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21407160_21407937 2L 21407160 21407937 CG33803 CG33909 His3:CG33803 His4:CG33909 TSS overlap 53.32077393 21407789 1.854 21407509 2.920365535 21407509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21411228_21411874 2L 21411228 21411874 CG17949 CG31618 CR33727 His2B:CG17949 His2A:CG31618 snmRNA:430:CR33727 TSS overlap 43.8808554 21411432 2.495 21411432 2.810704961 21411432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21412275_21412716 2L 21412275 21412716 CG31611 His4:CG31611 transcript overlap 56.83095723 21412485 2.111 21412619 2.847258486 21412485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21416087_21416367 2L 21416087 21416367 CG33908 His2B:CG33908 TSS overlap 27.50101833 21416197 1.708 21416197 1.821148825 21416197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21421083_21421902 2L 21421083 21421902 CG33906 CR33728 CG33808 His2B:CG33906 snmRNA:430:CR33728 His2A:CG33808 TSS overlap 50.6191446 21421750 2.101 21421193 2.553524804 21421193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21422446_21423108 2L 21422446 21423108 CG33905 CG33809 His4:CG33905 His3:CG33809 TSS overlap 39.89205703 21422960 2.189 21422960 2.624020888 21422557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21426249_21426823 2L 21426249 21426823 CG33904 CR33811 His2B:CG33904 His-Psi:CR33811 TSS overlap 54.15376782 21426653 2.545 21426653 2.681462141 21426653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21427383_21427995 2L 21427383 21427995 CG33903 CG33812 His4:CG33903 His3:CG33812 TSS overlap 54.88391039 21427493 2.645 21427493 2.778067885 21427493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21440557_21441071 2L 21440557 21441071 CG33814 His2A:CG33814 transcript overlap 48.32281059 21440629 2.43 21440629 3.253263708 21440629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21441472_21441985 2L 21441472 21441985 CG33815 CG33901 His3:CG33815 His4:CG33901 TSS overlap 40.01731161 21441549 2.011 21441549 2.625326371 21441549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21445580_21446052 2L 21445580 21446052 CG33817 CR33730 CG33900 His2A:CG33817 snmRNA:430:CR33730 His2B:CG33900 TSS overlap 44.99083503 21445620 2.128 21445620 2.712793734 21445900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21446596_21447000 2L 21446596 21447000 CG33899 His4:CG33899 transcript overlap 48.32077393 21446707 2.268 21446707 3.64229765 21446707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21450501_21451112 2L 21450501 21451112 CG33820 CG33898 CR33731 His2A:CG33820 His2B:CG33898 snmRNA:430:CR33731 TSS overlap 54.901222 21450960 2.053 21450540 2.194516971 21450680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21451656_21452317 2L 21451656 21452317 CG33821 CG33897 His3:CG33821 His4:CG33897 TSS overlap 36.99287169 21452170 1.945 21452170 2.541775457 21451767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21455557_21456128 2L 21455557 21456128 CG33896 CR33732 CG33823 His2B:CG33896 snmRNA:430:CR33732 His2A:CG33823 TSS overlap 41.03767821 21456026 1.948 21456026 2.94386423 21455746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21456839_21457364 2L 21456839 21457364 CG33895 CG33824 His4:CG33895 His3:CG33824 TSS overlap 34.33503055 21457221 2.076 21456942 2.293733681 21456942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21460736_21461171 2L 21460736 21461171 CG33894 CR33733 CG33826 His2B:CG33894 snmRNA:430:CR33733 His2A:CG33826 TSS overlap 37.59063136 21460789 2.127 21460789 2.917754569 21460789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21461882_21462407 2L 21461882 21462407 CG33827 CG33893 His3:CG33827 His4:CG33893 TSS overlap 28.7311609 21462264 2.083 21461985 2.492167102 21461985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21465238_21466214 2L 21465238 21466214 CG33829 CR33734 CG33892 His2A:CG33829 snmRNA:430:CR33734 His2B:CG33892 TSS overlap 47.46334012 21465279 2.325 21465832 3.280678851 21465832 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21466652_21467197 2L 21466652 21467197 CG33891 His4:CG33891 6 28.53971487 21466762 2.061 21467028 2.489556136 21467028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21470492_21471257 2L 21470492 21471257 CG33832 CR33735 CG33890 His2A:CG33832 snmRNA:430:CR33735 His2B:CG33890 TSS overlap 48.98472505 21470875 2.353 21471155 2.5 21471155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21471695_21472237 2L 21471695 21472237 CG33889 His4:CG33889 11 34.37780041 21471805 2.145 21471805 2.25848564 21471805 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21475335_21476173 2L 21475335 21476173 CR33736 CG33835 CG33888 snmRNA:430:CR33736 His2A:CG33835 His2B:CG33888 TSS overlap 39.67922607 21476003 2.161 21475726 2.490861619 21476003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21476979_21477181 2L 21476979 21477181 CG33887 His4:CG33887 transcript overlap 32.50712831 21477090 1.588 21477090 2.91383812 21477090 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21481008_21481218 2L 21481008 21481218 CG33886 CG33838 CR33737 His2B:CG33886 His2A:CG33838 snmRNA:430:CR33737 TSS overlap 37.42668024 21481048 1.728 21481048 2.002610966 21481048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21482024_21482692 2L 21482024 21482692 CG33885 CG33839 His4:CG33885 His3:CG33839 TSS overlap 72.13136456 21482536 2.18 21482536 2.810704961 21482135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21485706_21486525 2L 21485706 21486525 CG33841 CG33884 CR33738 His2A:CG33841 His2B:CG33884 snmRNA:430:CR33738 TSS overlap 63.07637475 21486373 2.043 21485816 2.591383812 21486093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21487069_21487729 2L 21487069 21487729 CG33842 CG33883 His3:CG33842 His4:CG33883 TSS overlap 37.81771894 21487581 1.848 21487180 2.678851175 21487180 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2L_21490800_21491558 2L 21490800 21491558 CR33739 CG33882 CG33844 snmRNA:430:CR33739 His2B:CG33882 His2A:CG33844 TSS overlap 68.4185336 21491187 2.352 21491467 2.733681462 21491467 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21491987_21492791 2L 21491987 21492791 CG33845 CG33881 His3:CG33845 His4:CG33881 TSS overlap 56.08350305 21492636 1.967 21492363 2.903394256 21492363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21495523_21496012 2L 21495523 21496012 CG33880 His2B:CG33880 155 34.11405295 21495634 2.028 21495634 2.010443864 21495634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21496151_21496623 2L 21496151 21496623 CR33740 CG33847 CG33880 snmRNA:430:CR33740 His2A:CG33847 His2B:CG33880 TSS overlap 42.81873727 21496471 2.162 21496471 2.300261097 21496471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21497167_21497835 2L 21497167 21497835 CG33848 CG33879 His3:CG33848 His4:CG33879 TSS overlap 35.39307536 21497679 2.065 21497679 2.563968668 21497400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21501195_21501405 2L 21501195 21501405 CG33850 CG33878 CR33741 His2A:CG33850 His2B:CG33878 snmRNA:430:CR33741 TSS overlap 40.73930754 21501235 1.892 21501235 1.889033943 21501235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21502211_21502879 2L 21502211 21502879 CG33851 CG33877 His3:CG33851 His4:CG33877 TSS overlap 50.54276986 21502322 2.325 21502322 3.488250653 21502322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21506101_21506240 2L 21506101 21506240 CG33876 His2B:CG33876 transcript overlap 18.78513238 21506140 1.496 21506140 1.544386423 21506140 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21507256_21507917 2L 21507256 21507917 CG33854 CG33875 His3:CG33854 His4:CG33875 TSS overlap 37.48676171 21507367 1.779 21507367 2.577023499 21507367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21510736_21511555 2L 21510736 21511555 CR33743 CG33856 CG33874 snmRNA:430:CR33743 His2A:CG33856 His2B:CG33874 TSS overlap 46.51832994 21511123 2.033 21511123 2.553524804 21511123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21512099_21512502 2L 21512099 21512502 CG33873 His4:CG33873 transcript overlap 50.6191446 21512210 2.21 21512210 2.946475196 21512210 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21515787_21516398 2L 21515787 21516398 CG33872 CG33859 CR33744 His2B:CG33872 His2A:CG33859 snmRNA:430:CR33744 TSS overlap 45.59063136 21516246 2.116 21515966 2.719321149 21515966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21516942_21517603 2L 21516942 21517603 CG33871 CG33860 His4:CG33871 His3:CG33860 TSS overlap 37.02953157 21517455 1.975 21517455 2.770234987 21517053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21520769_21521241 2L 21520769 21521241 CG33870 CR33745 CG33862 His2B:CG33870 snmRNA:430:CR33745 His2A:CG33862 TSS overlap 47.39816701 21520809 2.273 21520809 2.332898172 21521089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21521785_21522453 2L 21521785 21522453 CG33869 CG33863 His4:CG33869 His3:CG33863 TSS overlap 45.90733198 21522297 2.15 21521896 2.889033943 21521896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2L_21525557_21526353 2L 21525557 21526353 CG33865 CG33868 CR33746 His2A:CG33865 His2B:CG33868 snmRNA:430:CR33746 TSS overlap 56.94602851 21525935 2.12 21526215 2.770234987 21525935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21606293_21606913 2L 21606293 21606913 CG2201 CG2201 transcript overlap 1.643584521 21606465 3.468 21606330 5.148825065 21606330 0 1 1 0 0 0 0 0 0 0 0 0 2 1 1 1 1 0 1 0 0 0 0 0 2L_21616961_21617361 2L 21616961 21617361 CG2207 Df31 transcript overlap 2.554989817 21616964 1.991 21616964 1.906005222 21616964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21620567_21621644 2L 21620567 21621644 CG1506 Ac3 transcript overlap 1.116089613 21621474 2.139 21621474 2.506527415 21620914 0 0 0 0 0 0 1 1 0 0 0 0 3 2 1 0 0 0 1 0 0 0 0 0 2L_21736505_21736766 2L 21736505 21736766 CG11628 Grp1 transcript overlap 2.132382892 21736597 2.749 21736597 2.412532637 21736597 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 1 1 0 0 0 0 2L_21797665_21797945 2L 21797665 21797945 CG31612 CG31612 14627 1.00101833 21797775 2.381 21797775 1.754569191 21797775 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21831058_21831334 2L 21831058 21831334 CG1374 tsh 14870 1.190427699 21831167 2.334 21831167 2.101827676 21831167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21834858_21835698 2L 21834858 21835698 CG1374 tsh 18670 1.599796334 21835248 4.315 21835248 5.270234987 21835248 0 1 1 0 0 0 3 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2L_21836241_21836755 2L 21836241 21836755 CG1374 tsh 20053 1.358452138 21836615 1.904 21836335 3.054830287 21836615 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 2L_21840612_21841400 2L 21840612 21841400 CG1374 tsh 24424 1.652749491 21840980 3.813 21841259 3.922976501 21841259 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21848032_21848773 2L 21848032 21848773 CG1374 tsh 31844 1.433808554 21848343 4.099 21848343 7.176240209 21848343 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2L_21851003_21851546 2L 21851003 21851546 CG11629 CG11629 34308 1.953156823 21851377 2.511 21851113 3.740208877 21851113 0 0 0 0 0 0 2 1 0 0 0 0 2 2 0 0 0 0 2 2 0 0 0 0 2L_21856577_21857100 2L 21856577 21857100 CG11629 CG11629 28754 1.551934827 21856658 2.451 21856938 2.570496084 21856938 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2L_21864231_21865404 2L 21864231 21865404 CG11629 CG11629 20450 1.196537678 21864621 2.649 21864935 4.937336815 21864935 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 2L_21946185_21946464 2L 21946185 21946464 CG2528 CG2528 34062 1.516293279 21946294 1.321 21946294 2.766318538 21946294 0 0 0 0 0 0 0 0 0 0 0 0 2 1 1 0 0 0 0 0 0 0 0 0 2L_22006191_22006880 2L 22006191 22006880 CR33987 CR33987 29 1.547861507 22006780 3.923 22006526 6.263707572 22006526 0 1 1 0 0 0 2 1 1 1 1 1 3 1 1 1 1 1 0 0 0 0 0 0 2L_22138820_22139448 2L 22138820 22139448 CG6448 CG6448 transcript overlap 1.717922607 22138999 2.833 22138999 4.960835509 22139278 0 0 0 0 0 0 2 1 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 2R_1220753_1221313 2R 1220753 1221313 CG8376 ap transcript overlap 1.362525458 1220863 2.168 1221143 3.048302872 1221143 0 0 0 0 0 0 4 1 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 2R_1365604_1365879 2R 1365604 1365879 CG14469 dpr12 transcript overlap 0.823828921 1365709 5.226 1365709 6.838120104 1365709 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_1407942_1408729 2R 1407942 1408729 CG12551 CG12551 19592 0.956211813 1408279 9.748 1408279 15.78720627 1408279 0 1 1 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 2R_1442663_1442943 2R 1442663 1442943 CG14470 CG14470 10418 1.349287169 1442773 1.65 1442773 1.866840731 1442773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_1444790_1446352 2R 1444790 1446352 CG14470 CG14470 12545 2.00305499 1445919 4.97 1445919 6.742819843 1445641 1 0 1 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 2 0 0 0 0 0 2R_1543676_1543929 2R 1543676 1543929 CG33131 SCAP 782 1.916496945 1543760 2.244 1543760 2.690600522 1543760 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_1625968_1626480 2R 1625968 1626480 CG1765 EcR transcript overlap 1.146639511 1626091 4.442 1626091 5.938642298 1626091 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2R_1628034_1628582 2R 1628034 1628582 CG1765 EcR transcript overlap 1.536659878 1628133 1.987 1628133 3.016971279 1628133 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_1629140_1630168 2R 1629140 1630168 CG1765 EcR transcript overlap 3.483706721 1629519 7.437 1629519 10.07441253 1629519 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2R_1632786_1633567 2R 1632786 1633567 CG1765 EcR transcript overlap 1.368635438 1633437 2.292 1633157 5.238903394 1633157 0 1 1 0 0 0 2 1 0 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2R_1640158_1640942 2R 1640158 1640942 CG1765 EcR transcript overlap 1.528513238 1640518 2.274 1640518 2.15535248 1640518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2R_1641466_1642154 2R 1641466 1642154 CG1765 EcR transcript overlap 3.591649695 1641576 2.357 1641776 2.818537859 1641776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2R_1701326_1704550 2R 1701326 1704550 CG11212 Ptr TSS overlap 2.315682281 1701685 6.843 1703054 12.35248042 1703054 1 0 1 0 0 0 9 4 4 2 0 0 8 3 1 0 0 0 5 0 0 0 0 0 2R_2026318_2026863 2R 2026318 2026863 CG9397 1.28 transcript overlap 1.512219959 2026693 4.765 2026428 4.664490862 2026428 0 0 0 0 0 0 3 2 2 2 1 0 2 1 1 1 0 0 0 0 0 0 0 0 2R_2028401_2028905 2R 2028401 2028905 CG9397 1.28 transcript overlap 1.311608961 2028735 3.02 2028507 5.591383812 2028735 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2030245_2030792 2R 2030245 2030792 CG9397 1.28 transcript overlap 0.727087576 2030355 2.05 2030622 3.152741514 2030622 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2R_2039634_2040192 2R 2039634 2040192 CG9397 1.28 transcript overlap 1.224032587 2039744 2.214 2039744 3.409921671 2040022 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2R_2084615_2086226 2R 2084615 2086226 CG15233 CG15233 26565 2.459266802 2085482 18.873 2085482 30.09660574 2085482 1 0 1 0 0 0 1 0 0 0 0 0 3 2 2 2 2 2 2 2 0 0 0 0 2R_2089824_2090384 2R 2089824 2090384 CG15233 CG15233 22407 1.83503055 2089934 2.254 2089934 3.114882507 2090214 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2R_2097408_2098239 2R 2097408 2098239 CG15233 CG15233 14552 1.356415479 2097797 5.95 2097797 11.56266319 2097797 0 1 1 0 0 0 2 2 1 1 0 0 3 3 3 2 1 0 1 1 1 0 0 0 2R_2114777_2115055 2R 2114777 2115055 CG15233 CG15233 1986 1.16496945 2114887 1.747 2114887 2.983028721 2114887 0 0 0 0 0 0 1 1 1 1 1 0 1 1 1 1 0 0 1 0 0 0 0 0 2R_2122253_2122617 2R 2122253 2122617 CG15234 CG15234 transcript overlap 1.99694501 2122289 1.954 2122289 2.399477807 2122289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2R_2124399_2125164 2R 2124399 2125164 CG9403 jing transcript overlap 3.32790224 2124840 3.704 2124840 3.189295039 2124473 0 0 0 0 0 0 2 1 1 0 0 0 4 2 2 0 0 0 0 0 0 0 0 0 2R_2141649_2142439 2R 2141649 2142439 CG3161 Vha16 transcript overlap 1.842158859 2142269 2.816 2141722 3.365535248 2141722 0 0 0 0 0 0 2 1 1 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 2R_2277868_2278144 2R 2277868 2278144 CG3427 Epac transcript overlap 1.246435845 2277978 2.827 2277978 4.035248042 2277978 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2321885_2322442 2R 2321885 2322442 CG3450 l(2)k03203 TSS overlap 2.089613035 2322275 3.066 2322135 2.762402089 2322135 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2R_2325703_2326223 2R 2325703 2326223 CG3287 CG3287 transcript overlap 1.846232179 2325788 2.735 2325788 5.040469974 2325788 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2348356_2348887 2R 2348356 2348887 CG15236 CG15236 transcript overlap 1.022403259 2348743 2.753 2348466 3.483028721 2348466 0 0 0 0 0 0 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2368820_2369085 2R 2368820 2369085 CG9446 coro 15497 1.17209776 2368930 1.674 2368930 3.392950392 2368930 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2384310_2384505 2R 2384310 2384505 CG9446 coro transcript overlap 2.989816701 2384419 1.801 2384419 0.936031332 2384419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2488248_2488497 2R 2488248 2488497 CG3572 vimar transcript overlap 0.934826884 2488358 1.971 2488358 2.917754569 2488358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2492078_2492509 2R 2492078 2492509 CG3572 vimar transcript overlap 1.077393075 2492328 3.421 2492328 4.609660574 2492328 0 0 0 0 0 0 2 2 2 1 0 0 3 2 1 1 0 0 0 0 0 0 0 0 2R_2517348_2517628 2R 2517348 2517628 CG30160 CG30160 transcript overlap 1.393075356 2517458 2.151 2517458 2.677545692 2517458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2R_2617623_2618609 2R 2617623 2618609 CG12833 esn transcript overlap 1.696537678 2618286 8.824 2618286 14.09660574 2618286 0 1 1 0 0 0 3 3 3 1 1 1 2 1 1 1 1 0 1 0 0 0 0 0 2R_2678132_2678608 2R 2678132 2678608 CG11084 pk transcript overlap 1.1598778 2678438 2.237 2678438 2.233681462 2678438 0 0 0 0 0 0 2 2 2 2 2 1 2 2 2 2 2 1 0 0 0 0 0 0 2R_2698825_2699349 2R 2698825 2699349 CG11084 pk transcript overlap 0.887983707 2698935 3.18 2699057 6.404699739 2699057 0 1 1 0 0 0 1 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2R_2755973_2758081 2R 2755973 2758081 CG1851 Ady43A TSS overlap 1.49490835 2756338 2.759 2757158 1.509138381 2756083 0 0 0 1 0 1 "Markstein et al., 2004" 1 0 0 0 0 0 2 1 1 0 0 0 3 1 1 0 0 0 2R_2758567_2759621 2R 2758567 2759621 CG1851 Ady43A 996 2.210794297 2759451 2.759 2758905 1.407310705 2758645 0 0 0 0 0 1 "Markstein et al., 2004" 0 0 0 0 0 0 3 1 0 0 0 0 0 0 0 0 0 0 2R_2891089_2891367 2R 2891089 2891367 CG17800 Dscam transcript overlap 1.231160896 2891199 2.884 2891199 2.257180157 2891199 0 0 0 0 0 1 "Stathopoulos et al., 2002 " 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2891911_2894049 2R 2891911 2894049 CG17800 Dscam TSS overlap 7.255600815 2892554 17.784 2892554 27.79634465 2892554 1 0 1 0 0 1 "Stathopoulos et al., 2002 " 3 1 1 1 1 0 3 2 1 1 1 0 3 0 0 0 0 0 2R_2907433_2907963 2R 2907433 2907963 CG1707 CG1707 TSS overlap 2.248472505 2907543 2.885 2907543 4.496083551 2907683 0 0 0 0 0 0 2 1 1 1 0 0 1 1 1 1 1 0 2 0 0 0 0 0 2R_2918770_2919507 2R 2918770 2919507 CG11166 CG11166 transcript overlap 1.595723014 2919405 2.467 2918850 5.618798956 2919130 0 1 1 0 0 0 5 3 2 2 2 0 1 1 1 1 1 0 0 0 0 0 0 0 2R_2930064_2931183 2R 2930064 2931183 CG11121 so TSS overlap 1.809572301 2930395 8.854 2930483 18.11096606 2930483 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2R_2938497_2938777 2R 2938497 2938777 CG11121 so transcript overlap 1.132382892 2938607 2.408 2938607 1.684073107 2938607 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 1 1 0 1 1 0 0 0 0 2R_2959239_2959714 2R 2959239 2959714 CG30502 CG30502 transcript overlap 1.107942974 2959264 2.549 2959544 4.567885117 2959544 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_2978918_2979472 2R 2978918 2979472 CG11140 Aldh-III transcript overlap 1.276985743 2979308 3.236 2979308 4.745430809 2979308 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2R_2989343_2990110 2R 2989343 2990110 CG11140 Aldh-III 368 4.798370672 2989697 2.13 2989697 3.336814621 2989697 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_2993909_2994749 2R 2993909 2994749 CG1624 dpld transcript overlap 2.988798371 2993987 1.766 2994532 2.729765013 2993987 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_2994924_2995165 2R 2994924 2995165 CG1624 dpld transcript overlap 1.353360489 2994995 1.02 2994995 1.800261097 2994995 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2R_2995445_2996807 2R 2995445 2996807 CG1624 dpld transcript overlap 3.011201629 2996394 2.193 2996114 4.328981723 2996114 0 0 0 0 0 0 2 1 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_2997613_2998666 2R 2997613 2998666 CG1624 dpld transcript overlap 2.688391039 2998519 2.794 2998239 4.445169713 2998239 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 0 0 0 0 0 2R_3002159_3002986 2R 3002159 3002986 CG1624 dpld 483 1.899185336 3002537 9.737 3002537 14.02088773 3002537 0 1 1 0 0 0 3 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3042538_3042812 2R 3042538 3042812 CG1600 CG1600 transcript overlap 4.197556008 3042648 3.123 3042648 2.680156658 3042648 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2R_3050209_3050990 2R 3050209 3050990 CG1598 CG1598 transcript overlap 1.250509165 3050596 3.687 3050596 6.267624021 3050596 0 1 1 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3104436_3104995 2R 3104436 3104995 CG2092 scra transcript overlap 1.427698574 3104545 3.254 3104825 5.7845953 3104825 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_3135262_3135746 2R 3135262 3135746 CG30492 CG30492 transcript overlap 1.094704684 3135577 4.187 3135577 5.134464752 3135577 0 1 1 0 0 0 3 3 2 2 0 0 2 2 2 2 0 0 0 0 0 0 0 0 2R_3203346_3203624 2R 3203346 3203624 CG1399 CG1399 4449 1.443991853 3203454 1.917 3203454 2.951697128 3203454 0 0 0 0 0 0 0 0 0 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 2R_3340840_3341401 2R 3340840 3341401 CG18853 CG18853 TSS overlap 2.596741344 3340870 2.769 3341231 3.446475196 3341231 0 0 0 0 0 0 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3343853_3344586 2R 3343853 3344586 CG12822 CG12822 TSS overlap 2.406313646 3343860 2.302 3344140 4.821148825 3344140 0 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_3413672_3414229 2R 3413672 3414229 CG30377 CG30377 transcript overlap 1.547861507 3414080 3.053 3413744 5.024804178 3413744 0 1 1 0 0 0 2 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 2R_3459491_3460051 2R 3459491 3460051 CG14764 CG14764 transcript overlap 2.8401222 3459881 4.361 3459881 6.839425587 3459881 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3471221_3471878 2R 3471221 3471878 CG2915 CG2915 TSS overlap 3.691446029 3471809 2.572 3471685 3.014360313 3471685 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2R_3473162_3473897 2R 3473162 3473897 CG2916 38965 TSS overlap 3.811608961 3473737 2.932 3473272 4.171018277 3473519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 2R_3530643_3531392 2R 3530643 3531392 CG14762 CG14762 5076 1.546843177 3530678 2.458 3530958 4.254569191 3530958 0 0 0 0 0 0 1 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2R_3542719_3542971 2R 3542719 3542971 CG18455 Optix 475 1.416496945 3542815 3.206 3542815 2.656657963 3542815 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 2R_3579975_3580805 2R 3579975 3580805 CG8715 lig transcript overlap 2.356415479 3580085 2.369 3580085 2.929503916 3580085 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_3605599_3606159 2R 3605599 3606159 CG8713 CG8713 transcript overlap 1.202647658 3605989 2.882 3605989 4.01305483 3605989 0 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_3633841_3634346 2R 3633841 3634346 CG30372 CG30372 transcript overlap 1.686354379 3633949 2.046 3633949 3.656657963 3633949 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 2R_3641382_3641912 2R 3641382 3641912 CG11508 CG11508 transcript overlap 1.300407332 3641769 3.51 3641492 3.334203655 3641492 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2R_3657630_3658008 2R 3657630 3658008 CG8709 CG8709 TSS overlap 1.565173116 3657776 2.34 3657866 3.428198433 3657866 0 0 0 0 0 0 2 2 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2R_3666821_3667065 2R 3666821 3667065 CG11546 l(2)02045 transcript overlap 1.535641548 3666931 1.395 3666931 2.990861619 3666931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3738312_3738592 2R 3738312 3738592 CG8704 dpn 5548 1.483706721 3738422 1.961 3738422 2.603133159 3738422 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_3757667_3758424 2R 3757667 3758424 CG14760 CG14760 7645 2.015274949 3758230 6.021 3758230 9.770234987 3758230 1 0 1 0 0 0 1 1 1 1 1 1 0 0 0 0 0 0 2 0 0 0 0 0 2R_3759727_3760244 2R 3759727 3760244 CG14760 CG14760 5825 1.424643585 3760080 2.967 3760080 3.416449086 3760080 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3761029_3761308 2R 3761029 3761308 CG14760 CG14760 4761 1.236252546 3761139 1.875 3761139 2.847258486 3761139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_3761868_3762686 2R 3761868 3762686 CG14760 CG14760 3383 0.961303462 3761978 2.271 3762238 3.193211488 3762238 0 0 0 0 0 0 2 1 1 1 0 0 1 1 1 1 0 0 0 0 0 0 0 0 2R_3872813_3873948 2R 3872813 3873948 CG30365 CG30365 TSS overlap 2.49389002 3873203 7.971 3873203 8.891644909 3873429 1 0 1 0 0 0 2 2 1 1 0 0 2 2 2 1 0 0 3 1 1 1 0 0 2R_4119468_4119748 2R 4119468 4119748 CG8643 rgr transcript overlap 1.750509165 4119578 2.443 4119578 2.154046997 4119578 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 2R_4142750_4143544 2R 4142750 4143544 CG8635 CG8635 transcript overlap 1.218940937 4143140 3.543 4143140 5.339425587 4143140 0 1 1 0 0 0 2 2 2 1 0 0 1 1 1 1 0 0 3 1 1 1 1 1 2R_4148249_4149352 2R 4148249 4149352 CG8635 CG8635 4474 1.489816701 4148358 2.732 4149182 2.75848564 4149182 0 0 0 0 0 0 3 3 3 1 1 0 3 2 1 1 1 0 2 1 1 1 0 0 2R_4151652_4151931 2R 4151652 4151931 CG8635 CG8635 7877 1.619144603 4151762 3.298 4151762 2.468668407 4151762 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 2R_4154841_4155926 2R 4154841 4155926 CG2411 ptc 5522 1.723014257 4155482 4.681 4155482 7.171018277 4155482 0 1 1 0 0 0 5 1 1 1 0 0 4 1 1 1 1 1 2 0 0 0 0 0 2R_4161409_4161901 2R 4161409 4161901 CG2411 ptc TSS overlap 2.391038697 4161729 2.64 4161729 2.890339426 4161729 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 0 0 0 0 2R_4166647_4168366 2R 4166647 4168366 CG2411 ptc transcript overlap 2.193482688 4166751 2.939 4166751 4.432114883 4166751 0 0 0 0 0 0 4 4 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_4169474_4170261 2R 4169474 4170261 CG2411 ptc transcript overlap 1.781059063 4169817 4.34 4169817 7.860313316 4169817 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_4231367_4231647 2R 4231367 4231647 CG14767 CG14767 transcript overlap 1.66293279 4231477 2.534 4231477 4.22845953 4231477 0 0 0 0 0 0 2 1 1 1 0 0 1 1 1 1 0 0 1 0 0 0 0 0 2R_4234988_4235376 2R 4234988 4235376 CG14767 CG14767 transcript overlap 1.244399185 4235097 2.452 4235097 4.377284595 4235097 0 0 0 0 0 0 4 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2R_4287223_4287435 2R 4287223 4287435 CG8746 CG8746 17011 1.306517312 4287298 1.903 4287298 3.203655352 4287298 0 0 0 0 0 0 2 0 0 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 2R_4311927_4312481 2R 4311927 4312481 CG33141 sns transcript overlap 3.657841141 4312312 3.996 4312312 3.039164491 4312312 0 0 0 0 0 0