Study Design

• Tissues
• Technology
  • Microarray Production
  • Analysis Techniques
• Network Motifs
  • Network Analysis

• Raw Data
• Literature Evidence of Autoregulation
• Binding Table of Analyzed Data
• Binding Site Presence in Autoregulatory Promoters
• Supporting Material (pdf)
• ChIP Protocol (pdf)

The following describes the design of the 10-slide promoter arrays which contain approximately 400,000 features used in this study. Arrays were produced by Agilent Technologies (www.agilent.com)
Microarray Production

This webpage contains links to detailed descriptions the methods used for ChIP-chip data analysis and quality control.